Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 41/305 (13%)

Query: 141 VLSGSATDAVAATQAEQIASRFAGDEEV--INSIKITSSQ----QVQLNVRFVEINRDVG 194
           +L GS    V       + +  A  +E+  +N     S Q    QV L  + +E+    G
Sbjct: 233 LLGGSGGQTVIVNPQAGVLTLRAYPDEIRQVNEFLGISQQRMHRQVILEAKILEVTLSDG 292

Query: 195 KELGTQISAAYAWSNGS----------VEFNSSPRATSNTPAGSLIGSLIG-------EG 237
            + G   S A++ SNG+           + N +P  TS  P    IG+L+G         
Sbjct: 293 YQQGINWSKAFS-SNGANYKIGSGSITQDSNGNP-ITSVLPGLDAIGNLLGGQSNVVISS 350

Query: 238 YSVDVAIDALEDRGMARRLAEPNLIARSGETSSFLAGGE--FPIPISEQDGT-------- 287
            S D  I  +  +G    L+ P + A + + +    G +  +   +S   GT        
Sbjct: 351 GSFDAVISFMATQGDLNVLSSPRVTASNNQKAVIKVGTDEYYVTDLSSVVGTGDNAQASP 410

Query: 288 -ITVSYKKFGVGLDFTPTVLSDGLIALDIEPEVSAIDNTAS---YRVGNIAIP--GFSVR 341
            IT++    G+ LD TP +   G + L + P V  ++       YR   I +P    S+R
Sbjct: 411 DITLTPFFSGISLDVTPQIDDQGNVLLHVHPAVIEVEQQTKKILYRSEEIELPLARSSIR 470

Query: 342 RARTSVDLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIV 401
            + + +  K G   +I GL++S       +VP LG +P LG LF +     ++T+LVI++
Sbjct: 471 ESDSVIRAKDGDVVVIGGLMKSNTVDQVSKVPFLGDVPALGHLFRNTTKLTQKTELVILL 530

Query: 402 TPHLV 406
            P +V
Sbjct: 531 KPTVV 535