Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 786 a.a., general secretion pathway protein GspD from Burkholderia phytofirmans PsJN

 Score = 81.6 bits (200), Expect = 8e-20
 Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 38/314 (12%)

Query: 138 GRIVLSGSATDAVAATQAEQIASRFAGDEEVINSIKITSSQQVQLNVRFVEINRDVGKEL 197
           G ++ + SAT+++  T AE +   +     VI+ +    +Q V L    VE+N +    L
Sbjct: 370 GGMIQADSATNSLIITAAEPV---YRNLRAVIDQLDARRAQ-VYLEALIVELNSNTSGNL 425

Query: 198 GTQISAAY-----------AWSNGSVEFNSSPRATSNTP--AGSLIGSLIGEGYSVD--- 241
           G Q   A              SN  V   ++  A  +T   AG+L    + +G ++    
Sbjct: 426 GIQWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQGLNIGWIH 485

Query: 242 ---------VAIDALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPISEQDG----TI 288
                      + AL     A  L+ PNLI    E +  + G   PI           T 
Sbjct: 486 NIFGVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATA 545

Query: 289 TVSYKKF-----GVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRA 343
           T ++  +     G+ L   P +   G++ L +  E SAI    +    N A P F+ R  
Sbjct: 546 TSAFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSI 605

Query: 344 RTSVDLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTP 403
           +++V   +G+  ++ GL+Q    +   +VP LG +P +G LF S+   R +T+L++ + P
Sbjct: 606 QSTVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRP 665

Query: 404 HLVKPIDPLKKVAS 417
            ++      + V S
Sbjct: 666 VIISDRGTAQAVTS 679