Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 338 a.a., D-gluconate TRAP transporter, periplasmic component (from data) from Pseudomonas stutzeri RCH2

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 14/268 (5%)

Query: 49  QLIAREVAAANVG-LEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSAT 107
           +L+A EVA A+ G L+++ F  +SL   +   NA+  G  +M         G   E +  
Sbjct: 51  KLLAEEVAKASGGKLKVRTFASASLGSDDQMQNALIGGAQEMMVGSTATLVGISKEMAVW 110

Query: 108 LMPGLVGNFDRAMRLNDSEFMGDIKKVIENAGALVIADAWLSGAFASKKNC---ITSPDT 164
             P L  +  +A ++ D      +   +E  G LV    W +G F +  N    I   + 
Sbjct: 111 DTPFLFTDPRQADQVLDGPVGRQVMDKLEEKG-LVGLVYWENG-FRNVTNSARPIEKLED 168

Query: 165 IKGQVIRAA-GPAFEEMLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQ 223
             G  +R    P F +     GA+   +P SE++T ++T  +D       + +S + +E 
Sbjct: 169 FNGVKLRVMPNPVFIDTFKRMGANAVPLPFSELFTALETKAVDGQENPFNTILSSKFYEV 228

Query: 224 AKCLTAPGENALWFMYEP--VLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQV 281
            K L+         +Y P  V VSKR +DGL+  +Q  ++ A EKA     E+ R+    
Sbjct: 229 QKYLSVTNH-----VYSPWIVTVSKRWWDGLSATEQGILMEAAEKARDAEREDTRREASQ 283

Query: 282 MIDTYKKAGVEVVEMSKEDYDAWLELAK 309
            +   K+ G+++ E+S ++     E A+
Sbjct: 284 ALAALKERGMQINEVSPDEIQRMREKAQ 311