Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 18/326 (5%)

Query: 13  VAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVG-LEIQVFPGSS 71
           +A +    A++  A T LK   Q     G +     +++A  +   + G +++ ++P + 
Sbjct: 9   IAILTLSAAASVNAATTLKMGMQ--ASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQ 66

Query: 72  LYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMRLNDSEFMGDI 131
           L         +T G LD+T           P   A ++P +  +FD   R+ +S+F   +
Sbjct: 67  LGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGV 126

Query: 132 KKVIENAGALVIADAWLSGAFASKKNC-ITSPDTIKGQVIRAAGPAFEEMLVEA---GAS 187
           +  +         D W +G   +  N  + S +  KG  +R   P  ++ L  A   GAS
Sbjct: 127 RDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRV--PNAKQNLNYAKLSGAS 184

Query: 188 ISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYEPVLVSKR 247
            + M  SE+Y  +QT  +D       +  + + +E  K L            + V++S+ 
Sbjct: 185 PTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIV---NDQMVIISES 241

Query: 248 VFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVVEMSKEDYDAWLEL 307
            +  L++  +  I  A +K      + V+  +  ++  +K  G+ V     E +      
Sbjct: 242 TWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPF----RE 297

Query: 308 AKASSYKNFAANVPGGDKLIEKALAV 333
           A    YK F +N+  G  ++ K  A+
Sbjct: 298 AMQPLYKEFDSNI--GQPIVSKLAAM 321