Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

 Score =  195 bits (495), Expect = 6e-54
 Identities = 120/420 (28%), Positives = 216/420 (51%), Gaps = 7/420 (1%)

Query: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60
           + ++ L   +  GMPIAFAL L     ++      +  +L   + +G  +   +++P F+
Sbjct: 5   VFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDV-QLLAQNLQAGADSFPLLAVPFFI 63

Query: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120
           L G  + +      +      +     GGL    I A  + + M+GS+ A  AA+  + +
Sbjct: 64  LAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALATLLL 123

Query: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180
           P M  RGYP S +SG +AAGG +  +IPPS+  ++YG+ T TSI +LF+AG++PG+++ +
Sbjct: 124 PMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLIMGM 183

Query: 181 -MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSE 239
            + + W +I  +      E +  + S  ER  VL      L++    +  L GG+ TP+E
Sbjct: 184 GLIVAWTLIARRID----EPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTE 239

Query: 240 AAGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQ 299
           AA   A   LAV  + YR   +  +  +   A + +  +M + AAA + A+ ++   +  
Sbjct: 240 AAVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPD 299

Query: 300 TVAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAI 359
            +AA +  +  +  +LM  I + ++  GM L     I++  P+L PI  +AG DP +F +
Sbjct: 300 EIAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGV 359

Query: 360 VLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDVAT 419
           +  +   +GLITPP+G  L V+  I  ++  + ++ G +P+ L+  + + LL   P + T
Sbjct: 360 MFVLIGSIGLITPPVGTVLNVVGGIG-RLRMETLVRGVMPFFLIYLVIVGLLIAVPSIIT 418