Pairwise Alignments

Query, 160 a.a., transcription elongation factor regulatory protein from Sinorhizobium meliloti 1021

Subject, 158 a.a., transcription elongation factor GreA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.7 bits (117), Expect = 2e-11
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 43  LQQAREAFDATSTIEDVNERRRQSAGPLRELRYFAERVRTAQL--VPDPASFDVVAFGST 100
           +  ARE  D     E    R  Q     R +R    ++  AQ+  V    +   + FG+T
Sbjct: 33  IASARELGDLKENAEYHAAREEQGICEAR-IRDIEGKLSNAQIIDVTKMVNNGRIIFGAT 91

Query: 101 VTFSRDDGRVQ-KYRIVGEDEADPKAGSISYVSPVARVLMGKSVGDVASV----GDQELE 155
           VT    D   +  YRIVG+DEA+ K   IS  SP+AR L+GK+ GD  S+    G  + E
Sbjct: 92  VTILNLDTDAEVTYRIVGDDEANIKENLISVNSPIARGLVGKNEGDEVSITTPGGLTDYE 151

Query: 156 ILAI 159
           I+++
Sbjct: 152 IISV 155