Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 231 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

 Score =  112 bits (279), Expect = 6e-30
 Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 3/150 (2%)

Query: 10  ERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLW 69
           ++L   +P+LR F  SL GSRDVADDLVQ    +A A+ +RF+ GT   AW F ILRNL+
Sbjct: 48  KQLALVIPHLRAFGRSLSGSRDVADDLVQETLLKAWAARKRFQAGTNMRAWTFIILRNLY 107

Query: 70  IDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCV 129
           + Q+RR +  G  DD+     +A  + +   +  + L  +  A+  LP  QRE ++LV  
Sbjct: 108 LSQMRRARFRGEWDDLVADRLLAAPAAQ---DKHVDLADMQRALLHLPQPQREALILVGA 164

Query: 130 EELSYREAADVMGIPIGTVMSRLMRARRSL 159
              +Y EAA++ G+ +GT+ SR+ R R +L
Sbjct: 165 GGFAYEEAAEICGVAVGTIKSRVARGRVAL 194