Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 170 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

 Score = 91.7 bits (226), Expect = 6e-24
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)

Query: 19  LRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQKT 78
           +RR+A +L      ADD+VQ A  RA+   + F+P      W+  I+ N++I   RR+  
Sbjct: 14  MRRYARALTRDDPDADDVVQDAILRAIERRKSFKPEFSRRRWLLAIVHNVFISGKRREAA 73

Query: 79  AGVQDDITERHDIAGSSGER----ETEARLTLKTVAEAITELPDEQREVVLLVCVEELSY 134
                  T R+D    + ER    E E R+ L  +A A   LP+  R V+ L  VE L+Y
Sbjct: 74  E------TRRNDRFAETLERNPDLEQEQRVRLSRIASAYASLPEHHRAVLHLTAVEGLTY 127

Query: 135 REAADVMGIPIGTVMSRLMRARRSLAE 161
           +E ADV+ IP+GTVMSRL RAR +L +
Sbjct: 128 QEVADVLDIPVGTVMSRLSRAREALKQ 154