Pairwise Alignments

Query, 670 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 677 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  402 bits (1033), Expect = e-116
 Identities = 234/620 (37%), Positives = 345/620 (55%), Gaps = 41/620 (6%)

Query: 18  GLQQIAFARGSAAAAQPSRLPTLVATAAAVAVLYFARDVFLPLAIAILLTFALAPLVSRL 77
           G++     R  A A     L +L      VA LYFA  V +P+ +AILL+F +APL + L
Sbjct: 9   GVRPATHIRAPATAFSLDSLISLAVGVTVVACLYFASAVLIPITLAILLSFLVAPLANAL 68

Query: 78  RRVGCPRSVAVIGTVTTAFLFLSAFGVVIAMQVSEVAQNLPTYQYNIVEKVRTLKET--G 135
            R+      +V   V  +   +   G VIA Q++++A  +P YQ  I +K+ T      G
Sbjct: 69  MRLRLGHVASVFAAVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIEQKMETAHSLTIG 128

Query: 136 SESQILERIGRVIERISTEISRPEPE----VRASPEPTP-ETKPLLVEIFSP-QRPIETL 189
             ++     G+ ++R + E  +P P+     R S   T  E   + VE+  P   P E  
Sbjct: 129 KLNRFASAAGQALQRATVEPPQPAPQRGPASRDSARSTASEPAAVPVEVREPVPTPFELA 188

Query: 190 KNIINPLLGPLATTGLVIVVVIFMLLEREELRDRFIRLVGYGDLHRTTEALQDAGARVGR 249
           + +++P + PL T  +V VV++ +LL+R++LRDR IRL G  DLHRTT  + +A  R+ R
Sbjct: 189 RRVLSPAISPLETAFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSR 248

Query: 250 YLLMQLVVNITYGIPLAIGLSLLGIPNAVLWGMLAIVLRFVPYIGPVIAAALPLFLAFAA 309
           Y + QL +N   G+ +  GL ++G+P+ +LWG+LA +LR VPY+G  I+A L   LA A 
Sbjct: 249 YFVSQLGLNAGVGVIIGTGLFMIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAV 308

Query: 310 APGWSLLVWTAALFIVLELLSNNVVEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVLS 369
           +PGW++ +W+ ALF+ +E+L   +VEP LYG  TGLSP +++VAAIFW+W+WGP+GL+LS
Sbjct: 309 SPGWTMAIWSLALFVSVEVLVGQIVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILS 368

Query: 370 TPLTVCLVVLGRHVPQFEFLEILLGNEPVLDPKERLYQRLLAGDPDEATDNAEDMLQEKY 429
           TPLT+CL+VLGRHV + EFL++LLG++P L P E  YQR LAGDPDEA + AE +L+E+ 
Sbjct: 369 TPLTLCLLVLGRHVRRLEFLDVLLGDQPALTPVENFYQRALAGDPDEAIEQAELLLRERS 428

Query: 430 LVEFYDTVAIPALLLAERDRARGALTNTQAAQIAQSANTLIANLEEIAGEEEGEEETSTE 489
           L  +YD VAI  L LA  D  RG++T TQ A+I  + N L+  L+   G ++ E  TS  
Sbjct: 429 LSSYYDEVAIKGLQLAANDVMRGSVTATQLARIEATTNDLVDGLD---GYDDREPVTSAA 485

Query: 490 AQE-----------SDDDNDDAEEYDLPPG--DGKS----------------VLCVGGRS 520
            +            SD+ N    E   PP    G S                VLC+ GR 
Sbjct: 486 NENWSAAGPLSPAASDESNVARTEAANPPSVTSGHSEETHATNQSPVAASSRVLCIPGRG 545

Query: 521 DLDDVTASMLAQTLWIQGADAAHATHEVLKAGNIKALQLEGRNAVVLSVLDQDFM-RHAK 579
            LD +  ++L Q L   G  +    HE     +I  L  +    V +  L  D +  H +
Sbjct: 546 PLDALATTILLQLLAKHGFASRALPHEAASRASIDQLDADDVGIVCILYLQIDGVPSHLR 605

Query: 580 FTVRRLKRIAPAARVGIVLW 599
           + VRR++   P   + + LW
Sbjct: 606 YLVRRIRARLPNVSIVVGLW 625