Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Sinorhizobium meliloti 1021

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

 Score = 98.2 bits (243), Expect = 7e-25
 Identities = 129/565 (22%), Positives = 234/565 (41%), Gaps = 78/565 (13%)

Query: 11  DARDRLLRGVELLNNAVKVTLGPKGRNVVIDKSYGAPRITKDGVSVAKEIELEDKFENMG 70
           DA+   +    ++   V+ TLGPKG + ++    G   +T DGV++ +E+ +E    +  
Sbjct: 19  DAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVE----HPA 74

Query: 71  AQMVRAVASKTNDLAGDGTTTATVLAASIFREGAKLVSVGMNPMDLKRGIDLGVAAVLAE 130
           A+M+  VA       GDGTTTA V+A  + R+  +L+   ++P  + +G           
Sbjct: 75  AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134

Query: 131 IKARATKVISSSEIAQVGTIAANGDAGVGEMIAR-AMEKVGNEGVITVEEARTADTELDV 189
           +K                TIA    A   E++ + AM  +  +G    +E + A+  ++ 
Sbjct: 135 LK----------------TIACEVGAQDKEILTKIAMTSITGKGAEKAKE-KLAEIIVEA 177

Query: 190 VEGMQFDRGYLSPYFVTNAEKMRVELEDPYIL---IHEKKLGSLQAMLPILEAAVQSGKP 246
           V  +  D G +    +   +K    ++D  ++   + +K+  S Q    + +A +     
Sbjct: 178 VSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNC 237

Query: 247 LLIISE-DVEGEVLATLVVNRLRGGLKIAAVKTPGFGDRRKAMLEDIAV---LTAGQMIS 302
            + I E + + E+  T               K   F ++ + ML+D+      +   ++ 
Sbjct: 238 AIEIKETETDAEIRIT------------DPAKLMEFIEQEEKMLKDMVAEIKASGANVLF 285

Query: 303 EDLGIKLENVTLDMLGR----ARRVLIEKDTTTIIDGSGDKASIQARVSQIKAQ------ 352
              GI  +++    L +    A R + + D   +   +G  A++   +  + AQ      
Sbjct: 286 CQKGI--DDLAQHYLAKEGIVAARRVKKSDMEKLAKATG--ANVITNIKDLSAQDLGDAG 341

Query: 353 -IEETASDYDKEKLQERLAKLAGGVAVIRVGGATELEVKEKKDRIDDALNATRAAVEEG- 410
            +EE     D     E          +IR  G TE  ++E    +DDA+      +E+G 
Sbjct: 342 LVEERKISGDSMIFVEECKHPKAVTMLIR--GTTEHVIEEVARAVDDAVGVVGCTIEDGR 399

Query: 411 IVPGGGVALLRAKSALVGLTDDNADVTAGIS-----IVRR---ALEAPIRQIADNAGVEG 462
           IV GGG       S  V L+    +   GIS      VR    ALE   R +A+NAG++ 
Sbjct: 400 IVSGGG-------STEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDA 452

Query: 463 SIVVGKLVDGRDHN----QGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLITA 518
             ++ K+      N     G +  T    DM + G+V+P +V   A++ A     +L+  
Sbjct: 453 IEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512

Query: 519 EAMIADIPERGSPQSTGNGAVDSMG 543
           + +IA    RG+P     G +  MG
Sbjct: 513 DDVIAAEKLRGAPDMGDMGGMPGMG 537