Pairwise Alignments
Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B
Score = 85.9 bits (211), Expect = 1e-20
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 15/374 (4%)
Query: 293 YQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQV 352
+ IGIA + D R ++VN C ML S ++LL+M + +HE+D + + + +
Sbjct: 210 FNVGNIGIAITSVDKRWIKVNPRLCQMLKYSEKELLSMNWEQMSHEEDISVDLAHFNQML 269
Query: 353 SGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRES 412
+G D Y + KR DG+++Y + + R G+ + + +D++ + + R S
Sbjct: 270 AGAIDQYELNKRFYAKDGSIVYTHMTVACKRI-AGKVQLVIAGFMDISAQTQSEMSVRAS 328
Query: 413 EQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQIGDKWCVTWRLYRPDGTYLP 472
+ + +L + + D + N+ +M G + D+ R++
Sbjct: 329 REQLSLVLASAELGFWDWDLNNDVIDRNERCADMLGCSV---DEMRHNHRIWMDS----I 381
Query: 473 HDQCPMAVTLKEDRPVRG-------EQAVAERPDGTRVPFIPYPTPLHDVAGKLVGAVNM 525
H MAV DR ++G E + + T D +GK + +
Sbjct: 382 HPDDRMAVLKSIDRHLQGHTDSHNVEYRIIRKNGETLWVRDTGRVMQKDSSGKAIRMCGV 441
Query: 526 LVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAEEVIGKPI 585
+DI+ E E AS+ S +A+ D +G I T N + GYS +EV+G I
Sbjct: 442 HLDITQVRHNQEQMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHI 501
Query: 586 NILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLKDARGRVVGAS 645
+ P + + + ++ E + K+G + LTV+ + DA R
Sbjct: 502 SQFYCPRNKPAFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAYQRPHRRV 561
Query: 646 KIARDITERRRSEE 659
+ DITE++ E+
Sbjct: 562 ALFSDITEKKAQEQ 575
Score = 72.8 bits (177), Expect = 1e-16
Identities = 70/312 (22%), Positives = 142/312 (45%), Gaps = 17/312 (5%)
Query: 153 KRIEAEVNCKSKDLEDF-----FENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGR 207
+R+E E + K K +DF F IG+ I S ++ N ++L Y E +
Sbjct: 188 RRLEIERDEKIKLQDDFLFRSQFNVGNIGIAITSVDKRWIKVNPRLCQMLKYSEKELLSM 247
Query: 208 HIAEFHADAPVIGDI--LDRLSCGEKLDRYPARLR--ARDGSIKHVLITSNSRFEDGKFV 263
+ + + + D+ +++ G +D+Y R A+DGSI + +T + GK
Sbjct: 248 NWEQMSHEEDISVDLAHFNQMLAGA-IDQYELNKRFYAKDGSIVYTHMTVACKRIAGKVQ 306
Query: 264 NTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRS 323
DI++ ++E + R + E+L+ +A +G + D + ++ N+ MLG S
Sbjct: 307 LVIAGFMDISAQTQSEMSVRASREQLSLVLASAELGFWDWDLNNDVIDRNERCADMLGCS 366
Query: 324 REQLL--NMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYL-DVYSS 380
+++ + ++D H DDR + R + G TD++ + R ++ +G +++ D
Sbjct: 367 VDEMRHNHRIWMDSIHPDDRMAVLKSIDRHLQGHTDSHNVEYRIIRKNGETLWVRDTGRV 426
Query: 381 TVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFN 440
+D +G+ V LD+T+ + ++ + + EA+ D +G I N
Sbjct: 427 MQKDSSGKAIRMCGVHLDITQVRHNQEQMELAASVYNNSSEAMS----VMDHKGNIITVN 482
Query: 441 KAAVEMAGRTPQ 452
A ++ G +P+
Sbjct: 483 AAFADITGYSPK 494
Score = 42.4 bits (98), Expect = 1e-07
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 119 DGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLEDFFENSAIGLH 178
DGS ++ + + R G +Q I F DIS Q + E V + L ++ +G
Sbjct: 286 DGSIVYTHMTVACKRI-AGKVQLVIAGFMDISAQTQSEMSVRASREQLSLVLASAELGFW 344
Query: 179 IVSAAGIILRANKAELELLGYPADEYVGRH---IAEFHADAPVIGDILDRLSCGEKLDRY 235
++ N+ ++LG DE H + H D DR++ + +DR+
Sbjct: 345 DWDLNNDVIDRNERCADMLGCSVDEMRHNHRIWMDSIHPD--------DRMAVLKSIDRH 396
Query: 236 ----------PARLRARDGSIKHVLITSNSRFED--GKFVNTRCFTTDITSLHETENAWR 283
R+ ++G V T +D GK + DIT + +
Sbjct: 397 LQGHTDSHNVEYRIIRKNGETLWVRDTGRVMQKDSSGKAIRMCGVHLDITQVRHNQ---- 452
Query: 284 ETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLL 328
E E A+ Y ++ ++ D G ++ VN AF + G S +++L
Sbjct: 453 EQMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVL 497
Score = 34.3 bits (77), Expect = 4e-05
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 108 TRNAEVIIERPDGSRIFALVNIRPL-RDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDL 166
+ N E I R +G ++ R + +D G DI+Q + + ++ +
Sbjct: 403 SHNVEYRIIRKNGETLWVRDTGRVMQKDSSGKAIRMCGVHLDITQVRHNQEQMELAAS-- 460
Query: 167 EDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEFH 213
+ NS+ + ++ G I+ N A ++ GY E +G HI++F+
Sbjct: 461 --VYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHISQFY 505
Score = 29.3 bits (64), Expect = 0.001
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 515 VAGKLVGAVNMLVDISDREKAAEYA----ERLASIVRFSDDAIVSKDTQGIIQTWNKGAE 570
+AGK+ + +DIS + ++ E+L+ ++ ++ D + N+
Sbjct: 301 IAGKVQLVIAGFMDISAQTQSEMSVRASREQLSLVLASAELGFWDWDLNNDVIDRNERCA 360
Query: 571 RLFGYSAEEVIGKP---INILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDV 627
+ G S +E+ ++ + P DR I ++ + E IRK+G + V
Sbjct: 361 DMLGCSVDEMRHNHRIWMDSIHPDDRMAVLKSIDRHLQGHTDSHNVEYRIIRKNGETLWV 420
Query: 628 SLTVSPL-KDARGRVVGASKIARDITERRRSEEHRKLLVNELNH 670
T + KD+ G+ + + DIT+ R ++E +L + N+
Sbjct: 421 RDTGRVMQKDSSGKAIRMCGVHLDITQVRHNQEQMELAASVYNN 464