Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 9e-62
 Identities = 111/262 (42%), Positives = 162/262 (61%), Gaps = 3/262 (1%)

Query: 11  AGLTTL--VILAGILAPWIAPFDPVLDADLMNSELPPDATFWFGTDGQGRDVYTRILYGA 68
           AGL  +  ++L  + APWIA  DP+L  +L  +   P    WFGTD  GRDV+ R++YG+
Sbjct: 40  AGLIVVATLMLVAVFAPWIAGHDPLLQ-NLAGALQAPSGVHWFGTDEYGRDVFARLVYGS 98

Query: 69  QISLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNGFTNVMLAIPSLIFALAVMAVLG 128
           +I+L + ++  VI   IG+ +G  +GY+GGW D L    T++ ++ PSL+ ALA +A LG
Sbjct: 99  RITLYIVLLVTVIVGPIGLLVGTVSGYFGGWVDSLFMRITDIFISFPSLVLALAFIAALG 158

Query: 129 PGLPSLLIALGLTNWSWTCRIARSSTLSLKSLGYVQAAQTLGYGDLRIMFTQILPNMMGP 188
           PGL   +IA+ LT W    R+AR+ TL L++  +V A Q  G    RI+   I+P  +  
Sbjct: 159 PGLEHAVIAIALTAWPPIARLARAETLPLRNADFVVAVQLQGASSTRIILRHIIPMCLSS 218

Query: 189 ILVMATLGMGSAVLSEAALSFLGLGIQPPFPSWGSMLTDARQLIQLAPWVAIFPGLAIFL 248
           +++  T+ M S +L+ AAL FLGLG Q P P WG+M++  R+ +  + W+   PG AI L
Sbjct: 219 VIIRLTMNMASIILTAAALGFLGLGAQAPLPEWGAMISTGRRYMLESWWLVAAPGAAIML 278

Query: 249 SVLGFNLLGDGLRDSLDPHMRT 270
             L FNLLGDGLRD LDP  ++
Sbjct: 279 VSLAFNLLGDGLRDVLDPRSQS 300