Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 9e-36
 Identities = 130/509 (25%), Positives = 226/509 (44%), Gaps = 35/509 (6%)

Query: 4   RLTLAAMLSLGVA---------AGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEE 54
           ++T A +L  G+A         A  + AG +           G+  A+LD   +    E 
Sbjct: 5   KITQALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPES 64

Query: 55  FITQAIHRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIY 114
            + + +   L + D+N N  V  +A S E + D K  T+H+RK+A + NG P+TA D +Y
Sbjct: 65  NVIRDLLEGLVNQDANGNV-VPGVAESWETT-DNKTFTFHIRKDAKWSNGDPVTAHDFVY 122

Query: 115 SYKRIANPENAFPGASFI--AVIKGAEDYIAGKADEIS-GLKKIDDHTLEITYTGTINPG 171
           S++R  +P  A P + ++    +K A++ IAG+ D+ + G K +DDHTL +    T  P 
Sbjct: 123 SFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTL-VFELETAVPY 181

Query: 172 FPLMQNTTVIYPSNVEGESTFG------KNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEG 225
           F +M   T + P +      FG      +N VG GA+V  + V   ++ +++  +Y+++ 
Sbjct: 182 FVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDK 241

Query: 226 RPYLDRINIVLMAEDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEVAEVYTRN 285
              L+++  + +    A    F + EI ++   P ++     +E  +   ++  ++ T  
Sbjct: 242 NTVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQ-GQLCTYY 300

Query: 286 IGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDKAPYAY 345
            GFN    PF D RVR+A+++AI+  ++ + ++     PA    P  +  F  +   Y  
Sbjct: 301 YGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGK 360

Query: 346 DPEK-----AKALLAEAGYADGFEFEVTASPNESWG-VPIVEAILPMLK-KVGITVKPKP 398
             +K     AK LL EAGY      + T   N S     I  AI  M K  +G+ +  + 
Sbjct: 361 MTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALEN 420

Query: 399 VESSTLGEAVTTNNFQAFI--WSNLSGPDPLNALRCYYSKTAQSACNYTSYASPEFDKLY 456
            E  T  +     NF      W      D   A        + +  N   Y S E+D + 
Sbjct: 421 QEWKTYLDTRRQGNFDVTRAGWCG----DYNEASSFLTLMLSSNTSNDPQYHSAEYDAVI 476

Query: 457 EAAQQERDSAKQNDLLRQANNIVQDDAPV 485
           E A+      ++  L   A  ++  D P+
Sbjct: 477 EKAKTSTSEEERQKLYADAEKLLARDMPI 505