Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (324), Expect = 3e-34
 Identities = 114/429 (26%), Positives = 196/429 (45%), Gaps = 60/429 (13%)

Query: 87  DGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRIANPENAFPGASFIAVIKGAEDYIAGKA 146
           D +   + LRK   FH+G   TADD+++++ R                +K + D+  G  
Sbjct: 79  DNETMRFTLRKGVKFHSGNDFTADDVVWTFNR----------------LKESADF-KGIF 121

Query: 147 DEISGLKKIDDHTLEITYTGTINPGFPLMQN-TTVIYPSNVE------------------ 187
           + +  L K+DD+T+EI   GT    +PL++N  T I+P + +                  
Sbjct: 122 EPLVSLTKVDDYTIEIKTAGT----YPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKH 177

Query: 188 GESTFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEE-GRPYLDRINIVLMAEDAARDVA 246
           G S   +N  G G F       G ++  ++   Y+++  +  +D++ + ++ EDA R  A
Sbjct: 178 GNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAA 237

Query: 247 FRNKEID-VSILGPTQYQAYQGEEGLKDHLLEVAEVYT--RNIGFNPAFEPFKDKRVRQA 303
             +  +D ++ + P  YQ  +  +G+    +    V T   N   NPA    KD RVRQA
Sbjct: 238 LLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPA---LKDVRVRQA 294

Query: 304 INHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDKAPYAYDPEKAKALLAEAGYADGF 363
           I +AIN   I+++++K  A  A+   P+    ++++  P  +D  KAK L+ EAGY  GF
Sbjct: 295 IVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAKELMKEAGYEKGF 353

Query: 364 EFEVTASPNESW--GVPIVEAILPMLKKVGITVKPKPV-------ESSTLGEAVTTNNFQ 414
              + A PN  +     I +A   ML K+GI V  K +       E       +    + 
Sbjct: 354 NLTMIA-PNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWH 412

Query: 415 AFIWSNLSGPDPLNALRCYYSKTAQSACNYTSYASPEFDKLYEAAQQERDSAKQNDLLRQ 474
                + +  + L   R   +   Q  C Y  Y++ E DKL  AA +E D  K++ +L++
Sbjct: 413 PDTEDSANFTEFLTMTRDSNTGKGQYNCGY--YSNAEVDKLVNAANEETDLEKRSTMLKK 470

Query: 475 ANNIVQDDA 483
              I+ ++A
Sbjct: 471 VEEILYNEA 479