Pairwise Alignments

Query, 243 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 1e-46
 Identities = 85/237 (35%), Positives = 148/237 (62%), Gaps = 5/237 (2%)

Query: 1   MTTPIIECRNLQKWYSGVHALKNVDLTIHPGETVGLVGDNGAGKSTLIKILSGVHHQDSG 60
           MT  I+    ++K + GV AL    L ++PG  + L+G+NGAGKSTL+K+L+G++ +D+G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  DVLIEGRRVALRSPKDAMRYGLETIYQYNSMVPTMSIARNLFIGREPMKWSVFGVGIMDQ 120
            +  +G+ V+ + P+D+   G+  I+Q  +++P ++IA N+F+GRE    S FG  + D+
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGRE--MTSPFGRILWDE 118

Query: 121 KRMRVESIQAIADVDLHLRSPDALVGELSGGQRQGVAIARAMHFKSKVLILDEPTNHLSV 180
              + + + A  +V     S   L+GELS G++Q V IA+A+ F+SKV+I+DEPT+ L+ 
Sbjct: 119 MHRKADQLLARLNVK---HSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTD 175

Query: 181 KETDKVIGFVRGLKAQGLTGIFISHNMQHVFQSCDRIVAMARGEIVFDKPTADTSID 237
            ET+ +   +  L+ QG   ++ISH ++ +F+ CD I  +  G+ + +    DT+ D
Sbjct: 176 TETESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNED 232



 Score = 96.7 bits (239), Expect = 8e-25
 Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 27/222 (12%)

Query: 16  SGVHALKNVDLTIHPGETVGLVGDNGAGKSTLIKILSGVHHQDSGDVLIEGRRVALRSPK 75
           SGVH   +V  T+  GE +G+ G  GAG++ L+K++ G    + G + + GR V   SP+
Sbjct: 267 SGVH---DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQ 323

Query: 76  DAMRYGLETIYQY---NSMVPTMSIARNLFIGREPMKWSVFGVGIMDQ--KRMRVESIQA 130
           D +  G+  I +    + +V  +S+  N+             +  +DQ  K +++     
Sbjct: 324 DGLANGIAYISEDRKGDGLVLGLSVKENM------------SLCALDQLSKGVQIRHADE 371

Query: 131 IADVDLHLR-------SPDALVGELSGGQRQGVAIARAMHFKSKVLILDEPTNHLSVKET 183
           +  VD  +R       S + ++G LSGG +Q VAIA+ +  K KVLILDEPT  + V   
Sbjct: 372 VIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAK 431

Query: 184 DKVIGFVRGLKAQGLTGIFISHNMQHVFQSCDRIVAMARGEI 225
            ++   +   KA+G++ I +S  M  V    DRI+ M  G I
Sbjct: 432 KEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRI 473