Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 660 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  332 bits (851), Expect = 3e-95
 Identities = 190/531 (35%), Positives = 310/531 (58%), Gaps = 15/531 (2%)

Query: 4   IENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAVEKG 63
           I+++SKS + + +  + S  +  G ++ + GPNG GK+TL R+I G E  D G+V + KG
Sbjct: 5   IQSLSKSYNGQDILSDFSLEVQSGVRLCVCGPNGCGKSTLLRIIAGVESADSGKVLLPKG 64

Query: 64  MTIGYFDQDVGE-MAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVERY 122
             +GY  Q++G+ +  R  +  V++         AE  E  T   D       +A + R 
Sbjct: 65  CRLGYVQQELGDDVLDRPLLDWVLDVLPAWHDFWAEW-EAATHAGD-------EAAIRRL 116

Query: 123 GEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRPDV 182
           G  QA  E++ GY  E RAR VL+GL F++      + KLSGGW+ R  LAR+L    DV
Sbjct: 117 GVKQAELEQVYGYNPEHRARAVLSGLGFAERKWSLPIRKLSGGWRERAKLARVLTAGADV 176

Query: 183 MLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYSGD 242
           +LLDEP+NHLDLE++ WLE FL  Y GAL+  +HDR FM+++ T ++ +         G 
Sbjct: 177 LLLDEPTNHLDLEAVEWLEAFLMDYKGALVFVAHDRVFMDKVGTHVLYLGASKPLYRRGT 236

Query: 243 YGFYDEQRALNARQQQAQFERQQAMLAKEIKFIERFKARASHASQVQSR---VKKLEK-I 298
           +  +   +     Q++ + +R Q  +A+++ F+ RF+A+A+ A Q  SR    KKLEK +
Sbjct: 237 FSQFVALQEEVEGQREREAQRLQEEIARKMDFVRRFRAKATKARQAGSRQKMAKKLEKEL 296

Query: 299 DRVEPPRRRQTVAFEFLPAPRSGEDVVNLKSVHKTYGSRT-IYDGLDFMVRRRERWCIMG 357
           +   P ++R+ + F +    R+ + ++++  +   +   T ++ GL F + R ++  + G
Sbjct: 297 ENYRPEQKRRELEFSWPEPARAEKTILSVVDLEYAFPDGTGLWPGLTFNIYRGQKIALAG 356

Query: 358 INGAGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDLLDGESTILQWLEE-RFPK 416
            NG GKSTLLK++ G      G+V +G  V++G+F+QH ++ L+   T+L  +     P+
Sbjct: 357 PNGCGKSTLLKVIGGRLEKSGGTVVMGTLVRMGFFSQHQLETLNPSGTVLSEIRRLSDPR 416

Query: 417 AGQAPLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLD 476
             +  L ++ G F       ++    LSGGEK+RL++A +     NFLVLDEPTNHLDL+
Sbjct: 417 TTEEELMSVLGLFLLGQSYFDRVVGELSGGEKSRLILATLFLARCNFLVLDEPTNHLDLE 476

Query: 477 TKEMLIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGINQYGGGYSEY 527
           ++E L++AL +Y+GT+L V+HDR  LS++++ +  L+P GI  Y GG+ EY
Sbjct: 477 SREALVEALQSYEGTILMVAHDRHLLSSVADEIWALSPGGITVYEGGFDEY 527



 Score =  111 bits (277), Expect = 1e-28
 Identities = 96/325 (29%), Positives = 141/325 (43%), Gaps = 62/325 (19%)

Query: 26  RGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAVEKGMTIGYFDQDVGEMAGRSAVAEV 85
           RG+KI L GPNG GK+TL ++I G+     G V +   + +G+F Q              
Sbjct: 348 RGQKIALAGPNGCGKSTLLKVIGGRLEKSGGTVVMGTLVRMGFFSQ------------HQ 395

Query: 86  MEGAGPISAVAAELHELETAMSDPDRMDEMDAIVERYGEVQARYEELDGYALEGRAREVL 145
           +E   P   V +E+  L    SDP   +E                             VL
Sbjct: 396 LETLNPSGTVLSEIRRL----SDPRTTEE-------------------------ELMSVL 426

Query: 146 AGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRPDVMLLDEPSNHLDLESLIWLENFLK 205
                 Q   D  V +LSGG K R+ LA + L R + ++LDEP+NHLDLES   L   L+
Sbjct: 427 GLFLLGQSYFDRVVGELSGGEKSRLILATLFLARCNFLVLDEPTNHLDLESREALVEALQ 486

Query: 206 GYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYSGDYGFYDEQRALNARQQ-------- 257
            Y+G +LM +HDR  ++ +  +I  +  G +T Y G +  YD  R    RQQ        
Sbjct: 487 SYEGTILMVAHDRHLLSSVADEIWALSPGGITVYEGGFDEYDAAR----RQQGDTGSLAS 542

Query: 258 -QAQFERQQAMLAK-EIKFIERFKARASHA-----SQVQSRVKKLEKIDRVEPPRRRQTV 310
              +  R+ A L++ ++K I+R +A   +A        Q    KLEK  ++E     Q  
Sbjct: 543 GAGEPRRETASLSRDDMKRIKREQAEQRNALYKELKPRQDAYAKLEK--QLETSLAEQAE 600

Query: 311 AFEFLPAPRSGEDVVNLKSVHKTYG 335
             + L  P    D V    + K +G
Sbjct: 601 VEQTLADPAVYADSVRTTELLKRFG 625