Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 637 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  341 bits (875), Expect = 4e-98
 Identities = 194/527 (36%), Positives = 289/527 (54%), Gaps = 12/527 (2%)

Query: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
           MI I         + L  EAS  +  G K+GLVG NG GK++L  +I G    D+G+ ++
Sbjct: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60

Query: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
             G  I    Q+   +   SA+  V++G      + A+LH  +         ++  AI  
Sbjct: 61  PSGWQIASVAQETPAL-DMSALEYVLDGDKEYRQLEADLHIAQ-------EHNDGHAIAT 112

Query: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
            +G++ A    + GYA+  RA  +LAGL FS+   +  V   SGGW+MR+ LA+ LL R 
Sbjct: 113 LHGKIDA----IGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRS 168

Query: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYS 240
           D++LLDEP+NHLDL+++ WLE ++K Y G L++ SHDR+F++ IV +I+ ++   L  Y 
Sbjct: 169 DLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNFYK 228

Query: 241 GDYGFYDEQRALNARQQQAQFERQQAMLAKEIKFIERFKARASHASQVQSRVKKLEKIDR 300
           G+Y  ++  RA    QQQ  FERQQ   A    F++RF+ +AS A Q QSR+K LE++  
Sbjct: 229 GNYSAFERIRAERMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTE 288

Query: 301 VEPPRRRQTVAFEFLPAPRSGEDVVNLKSVHKTYGSRTIYDGLDFMVRRRERWCIMGING 360
           + P +       EF P       ++ ++ V   YG + I   +   +    R  ++G NG
Sbjct: 289 LLPSQADSPFYMEFRPPEALPNPLIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNG 348

Query: 361 AGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDLLDGESTILQWLEERFPKAGQA 420
           AGKSTL+KL++G  +P  G       + +GYFAQH ++ L  + T LQ L    P A + 
Sbjct: 349 AGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQ 408

Query: 421 PLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEM 480
            LR   G FGF+GD      R  SGGEKARLV+A +++  PN L+LDEPTNHLDL+ +  
Sbjct: 409 ELRNFLGGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHA 468

Query: 481 LIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGINQYGGGYSEY 527
           L  AL  ++G M+ VSHDR  L    +    +    +  + G   +Y
Sbjct: 469 LTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFDGDLDDY 515



 Score =  109 bits (272), Expect = 4e-28
 Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 48/299 (16%)

Query: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
           +I++E ++     + +  +    L  G +IGL+G NGAGK+TL ++++GQ  P  G    
Sbjct: 312 LIKMEQVAVGYGDKQILSKVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEP 371

Query: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
             G+ IGYF Q                            H++E    D   +  +  +  
Sbjct: 372 NPGLNIGYFAQ----------------------------HQIEFLRLDDTPLQHLVRLAP 403

Query: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
                 AR +EL         R  L G  F+ +M    V   SGG K R+ LA ++  RP
Sbjct: 404 N-----AREQEL---------RNFLGGFGFNGDMALSPVRPFSGGEKARLVLALLVWQRP 449

Query: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYS 240
           +++LLDEP+NHLDLE    L   L+ ++GA+++ SHDR  +    +    +D G +  + 
Sbjct: 450 NLLLLDEPTNHLDLEMRHALTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGEVQAFD 509

Query: 241 GDYGFY-----DEQRALNARQQQAQFERQQAMLAKEIKFIE-RFKARASHASQVQSRVK 293
           GD   Y     D  +A +A Q     + + A+  K+ K +E   + + S   + Q++++
Sbjct: 510 GDLDDYHQWLLDAAKAASANQAANSDDTKPAVDKKQQKRLEAELRQKVSPLKRKQAKLE 568