Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 637 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  338 bits (868), Expect = 3e-97
 Identities = 193/527 (36%), Positives = 288/527 (54%), Gaps = 12/527 (2%)

Query: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
           MI I         + L  EAS  +  G K+GLVG NG GK++L  +I G    D+G+ ++
Sbjct: 1   MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM 60

Query: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
             G  I    Q+   +   SA+  V++G      + A+LH  +         ++  AI  
Sbjct: 61  PSGWQIATVAQETPALEV-SALEYVLDGDKEYRQLEADLHIAQ-------EHNDGHAIAT 112

Query: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
            +G++ A    + GYA+  RA  +LAGL FS+   +  V   SGGW+MR+ LA+ LL R 
Sbjct: 113 LHGKIDA----IGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRS 168

Query: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYS 240
           D++LLDEP+NHLDL+++ WLE ++K Y G L++ SHDR+F++ IV +I+ ++   L  Y 
Sbjct: 169 DLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYK 228

Query: 241 GDYGFYDEQRALNARQQQAQFERQQAMLAKEIKFIERFKARASHASQVQSRVKKLEKIDR 300
           G+Y  ++  RA    QQQ  +ERQQ   A    F++RF+ +AS A Q QSR+K LE++  
Sbjct: 229 GNYSAFERIRAERMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTE 288

Query: 301 VEPPRRRQTVAFEFLPAPRSGEDVVNLKSVHKTYGSRTIYDGLDFMVRRRERWCIMGING 360
           + P +       EF P       ++ ++ V   YG + I   +   +    R  ++G NG
Sbjct: 289 LLPSQADSPFYMEFRPPEALPNPLIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNG 348

Query: 361 AGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDLLDGESTILQWLEERFPKAGQA 420
           AGKSTL+KL++G  +P  G       + +GYFAQH ++ L  + T LQ L    P A + 
Sbjct: 349 AGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQ 408

Query: 421 PLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEM 480
            LR   G FGF GD      R  SGGEKARLV+A +++  PN L+LDEPTNHLDL+ +  
Sbjct: 409 ELRNFLGGFGFHGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHA 468

Query: 481 LIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGINQYGGGYSEY 527
           L  AL  ++G M+ VSHDR  L    +    +    +  + G   +Y
Sbjct: 469 LTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDY 515



 Score =  106 bits (264), Expect = 3e-27
 Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 59/315 (18%)

Query: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
           +I++E ++     + +       L  G +IGL+G NGAGK+TL ++++GQ  P  G    
Sbjct: 312 LIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEP 371

Query: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
             G+ IGYF Q                            H++E    D   +  +  +  
Sbjct: 372 NPGLNIGYFAQ----------------------------HQIEFLRLDDTPLQHLVRLAP 403

Query: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
                 AR +EL         R  L G  F  +M    V   SGG K R+ LA ++  RP
Sbjct: 404 N-----AREQEL---------RNFLGGFGFHGDMALSPVRPFSGGEKARLVLALLVWQRP 449

Query: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYS 240
           +++LLDEP+NHLDLE    L   L+ ++GA+++ SHDR  +    +    +D G +  + 
Sbjct: 450 NLLLLDEPTNHLDLEMRHALTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGQVQAFD 509

Query: 241 GDYGFY-----DEQRALNARQ-----------QQAQFERQQAMLAKEIKFIERFKARASH 284
           GD   Y     D  +A +A              + Q +R +A L +++  ++R +A+   
Sbjct: 510 GDLEDYHQWLLDAAKAASANSTVNGDDAKPAVDKKQQKRLEAELRQKVSPLKRKQAKLET 569

Query: 285 ASQ-VQSRVKKLEKI 298
             Q +  R+ +LE +
Sbjct: 570 DQQKLSERLAELEHL 584