Pairwise Alignments

Query, 666 a.a., selenocysteine-specific elongation factor from Sinorhizobium meliloti 1021

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis S2

 Score =  109 bits (273), Expect = 2e-28
 Identities = 105/387 (27%), Positives = 167/387 (43%), Gaps = 62/387 (16%)

Query: 3   VGTAGHIDHGKTTLV------------------------KALTGVD----TDRLKEEKAR 34
           V   GH+D GK+T V                        K   G +     D LKEE+ R
Sbjct: 10  VAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERER 69

Query: 35  GITIDLGFAYARFAKDAVTGFVDVPGHERFIHTMLAGAGGIDYAMLVVAADD---GIKPQ 91
           G+TID+       AK  VT  VD PGH  FI  M+ GA   D A+LVV  DD   GI+PQ
Sbjct: 70  GVTIDVAHKKFPTAKYEVT-IVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQPQ 128

Query: 92  TLEHLAILDLLGVSRGLVAITKADLADPARLENLTDEIGAVLSSTSLR-------DAEIL 144
           T EH+ +   LG+++  VAI K D  + +  +   +E+  +L    L+       + + +
Sbjct: 129 TREHVFLSRTLGITQLAVAINKMDTVNFSEADY--NEMKKMLGDQLLKMVGFNPDNIDFI 186

Query: 145 PVSVAAGQGIELLKERLAAAECATAASAVGG----------RFRLAVDRSFTLSGAGTVV 194
           PV+   G  +    E        T A  + G            RL +   ++++G GTV 
Sbjct: 187 PVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVP 246

Query: 195 TGTVLSGSVGVGDQVTVSPAGRSARVRSIHAQNQRAERGFAGQRCALNLAGEGISKDAIT 254
            G V +G +  GD+V   PAG    ++++   +++      G     N+   G+ K  I 
Sbjct: 247 VGRVETGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNV--RGVGKKDIK 304

Query: 255 RGDMVVDPHLHAPSDRLD--ADLSVLE-SETKPIGEWFSARFHHASAETGIRIVPLEGPL 311
           RGD V+    + P+   D  A + VL+      +G  ++  FH  +A+     + L+  L
Sbjct: 305 RGD-VLGHTTNPPTVAADFTAQIVVLQHPSVMTVG--YTPVFHAHTAQIACTFMELQKKL 361

Query: 312 LPGERRRVQLVLDRPIAAAVGDRFILR 338
            P      +++ + P     GD  I++
Sbjct: 362 NPATG---EVLEENPDFLKAGDAAIVK 385