Pairwise Alignments

Query, 1034 a.a., formate dehydrogenase subunit alpha from Sinorhizobium meliloti 1021

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  188 bits (478), Expect = 1e-51
 Identities = 161/614 (26%), Positives = 253/614 (41%), Gaps = 148/614 (24%)

Query: 59  CPYCSVACGVIIYSKGDLRKGEAADIIHIEGDADHPTNRGTLCPKGAALKDFVKSPTRLQ 118
           CPYC   CGV +  K          ++       HP N G  C KG+   +FV    RL+
Sbjct: 10  CPYCGTGCGVDLVVKD-------GTLVGTNPFKRHPVNEGKTCIKGSYCHEFVHRDDRLK 62

Query: 119 YPMHRKPGSDKFERISWEDAFDRIARLMKDDRDANFIAANAAGVPVNRWTTVGMLAASAT 178
            P+ RK G  +    SW++A + I+  +++                     VG  +++  
Sbjct: 63  TPLIRKNG--ELVEASWDEALELISGKLQNYSPEE----------------VGFFSSARC 104

Query: 179 TNETAWATFKFAKA-LGIVGFDNQARVUHGPTVSSLGPTFGRGAMTNSWTDIKNTDLVVV 237
           TNE  +   KFA+  +     D+ AR+ H  TV  LG  FG GAMTNS +DI++ D + +
Sbjct: 105 TNEDNYVFQKFARTVIKTNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFI 164

Query: 238 MGGNAAEAHPCGFKWVTEAKATRGAKLIVVDPRYTRTASVSDYYAPIRQGTDIAFLNGVM 297
           +G N  E HP   + V  AK  +G K+IV+DPRYT TA  +D Y  +  GT+IA LN +M
Sbjct: 165 IGSNTFEQHPLIARRVVRAK-EKGTKIIVIDPRYTPTAKQADLYLQLLPGTNIAVLNAIM 223

Query: 298 KYCIDNDKVQWDYMKAFTNASYLVKDGFGYQDGLFTGYDAEKRDYDKSTWDYVLGDDGFV 357
              +  + V  +++K  T          GY++                            
Sbjct: 224 HVLVKENLVDEEFIKNRTK---------GYEE---------------------------- 246

Query: 358 VTDPALQHPRCVWNLLKAHLAPYTPEMVERICGTPKDKFLKVAEMISECSSPTKTMTSMY 417
                          LK  L  YTPE   ++ G   +  ++ A+M    ++     + +Y
Sbjct: 247 ---------------LKTTLETYTPEYASKLSGVAPELIVEAAKMYGSANA----ASILY 287

Query: 418 ALGWTQHSSGSQNIRAMAMLQLILGNIGVRGGGMNALRGHSNIQGLTDLGLMSHLLTGYL 477
            +G TQ ++G  N+++   L +I GNIG  G G+N LRG +N+QG  D+G + ++  GY 
Sbjct: 288 CMGITQFTTGVNNVKSCCNLAMITGNIGKPGTGVNPLRGQNNVQGACDMGALPNVFPGYQ 347

Query: 478 TMPTEKDVDFTTYMSTRQFKPLRPGQTSYWQNYRKFMVSFQKAMWGDAARIDNDWAFNYL 537
            +P                            N+ K+  ++   +  +             
Sbjct: 348 AVPA---------------------------NHEKYAEAWNTCVDPNVG----------- 369

Query: 538 SKLDVPAYDVLRVFELMYAG-KVNGYICQGFNPLLAFPNRDKNTKALSNLKWLVTMDPLD 596
             L +P         L  AG +V      G NP+++ P+      AL +L  L+  D   
Sbjct: 370 --LSIPDM-------LAKAGEQVKCIYVMGENPMVSDPDIHHVEHALKSLDLLIVQDIFL 420

Query: 597 TETARFWENHGDFNPVDTASIQTEVFQLPTTCFAEEEGSLTNSGRWLQWHWAGGTPPGEA 656
           TETA                 Q     LP   +AE++G+ +N+ R +Q        PGEA
Sbjct: 421 TETA-----------------QVADVVLPGASWAEKDGTFSNTERRIQKINKAVDSPGEA 463

Query: 657 KHDTYIVAQIFLRM 670
             D  IV  +  +M
Sbjct: 464 IADWKIVKMLAEKM 477



 Score = 49.7 bits (117), Expect = 7e-10
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 17/129 (13%)

Query: 898  EFPYAATSYRLTEHFHYWTKHNRVNSALQP--EFFVEISEELAEEKNIENGGWVRVWSKR 955
            E+P   T+ R+  H+H  T   R         E FVEI  E AE+  I+N   V+V ++R
Sbjct: 559  EYPMTLTTGRIIFHYHTGTMTRRSKHMADEINEGFVEIHPEDAEKMGIKNKQKVKVSTRR 618

Query: 956  GSVKAKAVVTKRIRPLMCDGKPVHVVGIPLHWGFTGSAKKGLGPNSLAPFVGDANIETPE 1015
            G V   A +T  I+          VV +P H+  T +       N L     D N + PE
Sbjct: 619  GEVVVNAKITPNIKQ--------GVVFMPFHFAETAA-------NILTNPAQDPNCKIPE 663

Query: 1016 YKAFLVNIE 1024
            YK     +E
Sbjct: 664  YKVCAAKVE 672