Pairwise Alignments

Query, 1034 a.a., formate dehydrogenase subunit alpha from Sinorhizobium meliloti 1021

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  184 bits (466), Expect = 2e-50
 Identities = 162/616 (26%), Positives = 256/616 (41%), Gaps = 151/616 (24%)

Query: 59  CPYCSVACGVIIYSKGDLRKGEAADIIHIEGDADHPTNRGTLCPKGAALKDFVKSPTRLQ 118
           CPYC   CG+ +  K          ++       HP N G +C KG    +FV S  RL 
Sbjct: 11  CPYCGTGCGIDLVVKD-------GKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLT 63

Query: 119 YPMHRKPGSDKFERISWEDAFDRIARLMKDDRDANFIAANAAGVPVNRWTTVGMLAASAT 178
            P+ +K G  +F   +W++A D IA  +K                      V   + +  
Sbjct: 64  KPLIKKNG--EFIEATWDEALDLIAGKLKQYSPDE----------------VAFFSCARG 105

Query: 179 TNETAWATFKFAKA-LGIVGFDNQARVUHGPTVSSLGPTFGRGAMTNSWTDIKNTDLVVV 237
           TNE ++A  KFA+  L     D+ AR+ H PTV  LG  FG GAMTNS TD+   D++++
Sbjct: 106 TNEESYALQKFARTVLKTNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLI 165

Query: 238 MGGNAAEAHPCGFKWVTEAKATRGAKLIVVDPRYTRTASVSDYYAPIRQGTDIAFLNGVM 297
            G N  EAHP   + + +AK   G K+I +DPR T TA ++D +  +  G++I  +N + 
Sbjct: 166 YGSNTFEAHPLIARSIVKAK-ENGTKIIAIDPRTTHTAKMADLHLKLIPGSNIDLINTIT 224

Query: 298 KYCIDNDKVQWDYMKAFTNASYLVKDGFGYQDGLFTGYDAEKRDYDKSTWDYVLGDDGFV 357
              I       +++K  T                  GYD                     
Sbjct: 225 NIIIQEGMADEEFIKNRTE-----------------GYDE-------------------- 247

Query: 358 VTDPALQHPRCVWNLLKAHLAPYTPEMVERICGTPKDKFLKVAEMISECSSPTKTMTSMY 417
                          LK  ++ YT E    + G P +  L+ A M        +  + MY
Sbjct: 248 ---------------LKDVVSKYTLEKTAELSGIPAETILEAARMYGS----AENASIMY 288

Query: 418 ALGWTQHSSGSQNIRAMAMLQLILGNIGVRGGGMNALRGHSNIQGLTDLGLMSHLLTGYL 477
            LG T+++ G  N+++   L ++ GN+G  G G+N LRG +N+QG  D+G + ++  GY 
Sbjct: 289 CLGVTEYTFGVDNVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGY- 347

Query: 478 TMPTEKDVDFTTYMSTRQFKPLRPGQTSYWQNYRKFMVSFQKAMWGDA-ARIDNDWAFNY 536
                                                   QK   G+A  R++N W    
Sbjct: 348 ----------------------------------------QKV--GEAYERLENLWETAD 365

Query: 537 LSK-LDVPAYDVLRVFELMYAGKVNGYI-CQGFNPLLAFPNRDKNTKALSNLKWLVTMDP 594
           L++ + + + +VL       AG+   ++   G +P++A  + +   KAL +L + V  D 
Sbjct: 366 LNREIGLTSPEVLH-----KAGEQVKFLHIVGEDPMVADADINHVEKALKSLDFFVVQDI 420

Query: 595 LDTETARFWENHGDFNPVDTASIQTEVFQLPTTCFAEEEGSLTNSGRWLQWHWAGGTPPG 654
             TETA+  +                   LP  C+AE++G+ TNS R +Q        PG
Sbjct: 421 FLTETAKLAD-----------------VVLPAACWAEKDGTFTNSERRVQRIRKAVDAPG 463

Query: 655 EAKHDTYIVAQIFLRM 670
           +A  D  IV ++  +M
Sbjct: 464 DALPDWLIVRKLAEKM 479



 Score = 45.8 bits (107), Expect = 1e-08
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 895 LSDEFPYAATSYRLTEHFHYWTKHNRVNSALQP--EFFVEISEELAEEKNIENGGWVRVW 952
           + +E+P   T+ R+  H++  T   R +S      E F+EI+ E A+E  I+ G  VRV 
Sbjct: 558 IDEEYPLILTTGRIIFHYNSGTMTRRCDSITNEIDENFIEINTEDAKELGIKPGEKVRVS 617

Query: 953 SKRGSVKAKAVVTKRI 968
           S+RG+V A A VT+ +
Sbjct: 618 SRRGTVNADARVTENV 633