Pairwise Alignments

Query, 386 a.a., cytochrome o ubiquinol oxidase subunit II from Sinorhizobium meliloti 1021

Subject, 310 a.a., cytochrome O ubiquinol oxidase from Herbaspirillum seropedicae SmR1

 Score =  435 bits (1118), Expect = e-127
 Identities = 213/304 (70%), Positives = 244/304 (80%), Gaps = 1/304 (0%)

Query: 9   RRLAVLPLFLVMAGCDMVVMSPSGDIAAQQRDLIVISTILMLLIIVPVVFLTLFFAWRYR 68
           R L +LP  L++AGC+ VVM+PSGDIA QQ  LI+IST LMLLIIVPV+ LTL FAWRYR
Sbjct: 8   RGLLLLPA-LLLAGCNTVVMNPSGDIANQQARLIIISTALMLLIIVPVIILTLLFAWRYR 66

Query: 69  RSNTSATYDPEWHHSTALEVVIWSAPLAIIIALGAITWISTHKLDPYRPLDRLDAERAIP 128
           +SNTSA Y+P+W HST LE+VIW APL IIIALG +TWI+TH LDPYRPL R+DAER + 
Sbjct: 67  KSNTSAPYEPDWDHSTRLELVIWGAPLLIIIALGLLTWITTHTLDPYRPLSRIDAERPLS 126

Query: 129 ADARPLTVEVVALDWKWLFFYPDLGVAAVNELAAPVDVPIHFKITASSVMNSFYIPALAG 188
              +PL VEVVALDWKWLF YP+ G+A VNELAAPVDVPI FKITASSVMNSFYIPALAG
Sbjct: 127 PQVKPLVVEVVALDWKWLFIYPEQGIATVNELAAPVDVPIQFKITASSVMNSFYIPALAG 186

Query: 189 QIYAMPGMETKLHAVINKPGEYEGFSANYSGDGFSHMRFKFHGLDRQGFDDWVARVKAQG 248
           QIYAMPGMETKLHAVINK GEYEGFSANYSG GFSHMRFKFHGLD+ GFD WV + KA  
Sbjct: 187 QIYAMPGMETKLHAVINKAGEYEGFSANYSGAGFSHMRFKFHGLDQAGFDAWVQKAKAGS 246

Query: 249 TALNRDAYLKLEKPSEREPVRYYAAVEDGLYRAILNLCVTPGKMCMEEMMHIDMMGGAGK 308
             L+R  YLKLE+PSEREP R   + E  L+ AI+N CV P  +CM++MM  D+    G+
Sbjct: 247 GKLDRAEYLKLEQPSEREPARLIGSTEPNLFHAIVNRCVAPNTVCMDKMMATDLNVKPGQ 306

Query: 309 ESAE 312
           + AE
Sbjct: 307 QKAE 310