Pairwise Alignments

Query, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 276 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  123 bits (309), Expect = 4e-33
 Identities = 80/261 (30%), Positives = 142/261 (54%), Gaps = 6/261 (2%)

Query: 33  AVLVYMLFPYYWAIVSSTKT-GQALYQFTLLPALDFS--NYRQLFDNPVFMGALVNSGVV 89
           AV + + FP  W I++S KT  QA+    +    D++  NY  + +   +M  L NS ++
Sbjct: 19  AVGLLIFFPILWTILTSFKTEAQAISDPPVFLFFDWTLENYSVVQERSDYMRFLWNSVII 78

Query: 90  ALVSTAVSLVIGILAAYALGRLHFPPGRIVLIAVLMISVFPQVVVLSGMFEVIGWLGLYN 149
           A  ST + ++I + AA+++  +     + +L+ +L   + P V VL  ++ +   +GL +
Sbjct: 79  AGGSTILGIIIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYILFIKMGLLD 138

Query: 150 RPSALIVSYLILTLPFTTWILTSFIRDLPNELEEAALIDGCSRLRILTHVLLPLMGPAIA 209
               L+V  +++ LP   W+L ++ +++P E+ EAA +DG +    + +VL P+  P IA
Sbjct: 139 NRFGLVVVLMLINLPIIVWMLYTYFKEIPGEILEAARMDGATLKEEILYVLTPMAIPGIA 198

Query: 210 STGLLSFILAWNEFLFALTFILTDENRTVPVAIGLLTGSSRYEYPFGQIMAASVTVTLPL 269
           ST LL+ ILAWNE  + L        +  P+   + + SS     + ++ AAS     P+
Sbjct: 199 STLLLNIILAWNEAFWTLNLTAA---KAAPLTAFIASYSSPEGLFYAKLSAASTMAIAPI 255

Query: 270 LVLVLIFQRKIVAGLTSGAVK 290
           L+L    Q+++V+GLT GAVK
Sbjct: 256 LILGWFSQKQLVSGLTFGAVK 276