Pairwise Alignments

Query, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 291 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Burkholderia phytofirmans PsJN

 Score =  127 bits (320), Expect = 2e-34
 Identities = 84/298 (28%), Positives = 159/298 (53%), Gaps = 17/298 (5%)

Query: 3   VSAVTTRRYSNATYRTL-RRVKTAGLYAGVAAVLVYML-----FPYYWAIVSSTKTGQAL 56
           +S V +   SN T  T+  +   A +  G+  V+ +++     FP +W  +++ KT Q  
Sbjct: 1   MSQVASTPVSNPTAMTVPAKSPFAAIRRGIPGVIAWLVALLLFFPIFWMTITAFKTEQQA 60

Query: 57  YQFTL--LPALDFSNYRQLFDNPVFMGALVNSGVVALVSTAVSLVIGILAAYALGRLHFP 114
           Y  +L  +P LD  ++R++F    +     NS +++   T + L++ + AAYA+    FP
Sbjct: 61  YASSLFFIPTLD--SFREVFARSNYFSFAWNSILISAGVTILCLILAVPAAYAMA--FFP 116

Query: 115 PGRI--VLIAVLMISVFPQVVVLSGMFEVIGWLGLYNRPSALIVSYLILTLPFTTWILTS 172
             R   VL+ +L   + P V VL  ++ +    GL +  S L++ Y ++ LP   W+  +
Sbjct: 117 TRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGLLDSVSGLVIVYTLINLPIAVWMSFT 176

Query: 173 FIRDLPNELEEAALIDGCSRLRILTHVLLPLMGPAIASTGLLSFILAWNEFLFALTFILT 232
           +  ++P ++ EA  IDG +  + + ++L+P+  P +AST LL  IL+WNE  +++     
Sbjct: 177 YFAEIPRDILEAGRIDGAATWQEIVYLLMPMSLPGLASTALLLVILSWNEAFWSINL--- 233

Query: 233 DENRTVPVAIGLLTGSSRYEYPFGQIMAASVTVTLPLLVLVLIFQRKIVAGLTSGAVK 290
             +   P+ + + + SS     + ++ AAS+    P+L++  + Q+++V GLT GAVK
Sbjct: 234 SSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK 291