Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide from Sinorhizobium meliloti 1021

Subject, 323 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Acidovorax sp. GW101-3H11

 Score =  192 bits (487), Expect = 1e-53
 Identities = 108/311 (34%), Positives = 177/311 (56%), Gaps = 5/311 (1%)

Query: 20  IVGLSAH----SAAMAETTIRLGHVLADTHSWHKASTDFAKEVSEKTEGRVKIEIFPSGQ 75
           +VGLS      + A A+TT+R+    A       A   FAKEV ++T GR K++ F +G 
Sbjct: 7   VVGLSLALGFVATAAAQTTMRISISTAQNSHQGIAIDTFAKEVEKRTSGRYKVQTFYNGA 66

Query: 76  LGTEKEVIEGMQIGTIQGGLIGSGSFQFVEPKFGIIEMPYAWTSREQAFAALDGKLGTAL 135
           LG E+E IE +Q+GT +     +G      P+  I+++P+ +  +  A A LDG +G  +
Sbjct: 67  LGGERESIEAVQLGTQELAFSSTGPIPNFVPETKILDVPFLFRDKAHARAVLDGPIGQEM 126

Query: 136 ADLLRPKGIEVLAWWENGFRNITNNKHPIVKPADLAGIKIRVTPDKVRLATFERLGAQPA 195
                 KG + LAW ENGFR++TN+K  +  P DL G+K+R   + V +A ++  G    
Sbjct: 127 LTKFDSKGFKALAWAENGFRHMTNSKRSVNTPEDLKGLKMRTMENPVHIAAYKGFGIITT 186

Query: 196 PLAFGELYSALQQGVFDAQENPLSIIDASSFYEVQKYVSMTGHIWGAACLTVSSMTWAQV 255
           P+AF E+++ALQQG  D QENPL +I ++ F +VQK++++TGH++  A   ++  ++ ++
Sbjct: 187 PMAFPEVFTALQQGTVDGQENPLPVIISAKFDQVQKHLTLTGHVYSPAIFVMNKGSFDKL 246

Query: 256 SPEDQAIVKEAAVKWGNAQRQMVADNEVALIEKLKSKGMQ-FNEVDKAAFVDALKPIWES 314
           S  D+    +AA +   A R  V +++   +  L++KGM   +  DK+ FV AL P+   
Sbjct: 247 SAADKQAFIDAAKEGTKANRARVDEDDAKGVADLRAKGMTVVDNPDKSKFVAALAPVNAE 306

Query: 315 EKDVFGPELLE 325
            +  FG   L+
Sbjct: 307 FEKQFGKATLD 317