Pairwise Alignments

Query, 359 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., Predicted permease from Pseudomonas stutzeri RCH2

 Score =  174 bits (442), Expect = 3e-48
 Identities = 105/344 (30%), Positives = 177/344 (51%), Gaps = 19/344 (5%)

Query: 29  LVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAAATVAIAAFV 88
           L  LVV  +   ++ +PF  A+ WA++L ++F PL R + +RL      AA    +   +
Sbjct: 12  LALLVVVSLAFGWILLPFYGAVFWAVILAIIFAPLQRYLHRRLNQRRNLAAFVTLLVCLL 71

Query: 89  VAV-PLTFMAERLVNEAAKGAQIVEEA-VRSGTWRDALANYPRLAPVVVWIETQL----- 141
           VAV P+      LV E A   + +E   +  G+W   +A    L P  V ++ Q      
Sbjct: 72  VAVLPVILTTGMLVQEGATLYKQIESGELDIGSW---VARLRDLLPQSVQLQLQRFGFGD 128

Query: 142 ------DLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQALGALKE 195
                  LA  A   + +L   + SF +G+   ++   +  Y LF+F+RDG++ +  +++
Sbjct: 129 LESMRERLASGALEGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARIRK 188

Query: 196 YSPLSSQEMNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMVWGLAMGLL 255
             PLS  +  RLF +    V+A V G + VA  QGA+GG++F +LG+   ++WG+ M  L
Sbjct: 189 AIPLSDAQKRRLFNKFTRVVRATVKGNIVVAITQGALGGIIFAVLGISGALLWGVLMAFL 248

Query: 256 AVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLHTL 315
           +++P +GA ++W P A+   + G   + ++L  +G  V+  +DN+L PI VG   K+   
Sbjct: 249 SLLPAVGAGLIWTPVAIYFLMTGAIWQGVVLTLYGILVIGLVDNILRPILVGKDTKMPDY 308

Query: 316 TAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPEA 359
              +S +GG+ +FG  G VIGP+   V  L +  W    S  E+
Sbjct: 309 VVLISTLGGLALFGLNGFVIGPL---VAALFISTWGLFTSPEES 349