Pairwise Alignments

Query, 359 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (452), Expect = 2e-49
 Identities = 104/343 (30%), Positives = 176/343 (51%), Gaps = 29/343 (8%)

Query: 28  ILVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRL-RYPEAAAAATVAIAA 86
           ++VAL+   + CY+L  P++ ++  A +++++  P+H   EK+L  +   AA  +  +  
Sbjct: 14  LVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLT 73

Query: 87  FVVAVPLTFMAERLVNEAAKGAQIVEEAVRSGTWRDALANYPRLAPVVVWIETQLDLAG- 145
            ++ +PL F+   +V + +K +Q +   V  G  + AL N+P       W+   L LA  
Sbjct: 74  VIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQ-ALFNHP-------WVVKGLSLANH 125

Query: 146 -----------IAGSATSWLTNFSASFVRGSVAQIVDA-------ILTFYFLFYFLRDGQ 187
                      IA     + T F ++ V  S   + DA        L  + LF+ LRD  
Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185

Query: 188 QALGALKEYSPLSSQEMNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMV 247
           + + A++   PLS  + +RL + +    ++ V G+   A  QG  GG+  WL G P  + 
Sbjct: 186 KIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LF 244

Query: 248 WGLAMGLLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVG 307
           WG  MG  + +PV+G  ++W+PA L L L G+   A+ L  W   VV +IDNLL P  + 
Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304

Query: 308 DRLKLHTLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIW 350
               ++TL  F S++GGI +FG  GL+ GP+ F +T++L +I+
Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIY 347