Pairwise Alignments

Query, 359 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 24/318 (7%)

Query: 30  VALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAAATVAIAAFVV 89
           + +++  +    +A PFL  + +A     M  P    ++K   Y      A + I    V
Sbjct: 12  IFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKK---YTGRTLGAILCILMITV 68

Query: 90  -AVPLTFMAERLVNEAAKG---AQIVEEAVRSGTWRDALANYPRLAPVVVWIETQLDLAG 145
            A+ L F+    + E       A  V+  V+         NY  L  +      + DL+ 
Sbjct: 69  PAIILVFLILTDIFEFLNSLDYAGFVDYTVQ-------FINYIGLQNIA-----KEDLSS 116

Query: 146 IAGSATSWL---TNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQALGALKEYSPLSSQ 202
           I     ++L    N  A  + G     +  ++T +  +YFL+DG +   A+  + P    
Sbjct: 117 ILSEIWNFLKPTVNKMAGQIYGLPLLFIKGLVTVFLTYYFLKDGYRFKDAVMPHVPEVYH 176

Query: 203 EMNRLFTR-VNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMVWGLAMGLLAVVPVL 261
               LF R ++E  + +       A   G +    FW +GLP P+  G   G+L ++P++
Sbjct: 177 VQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALSGILTLLPIV 236

Query: 262 GAFIVWLPAALSLALGGEWGKALILVAWGAGVVATI-DNLLYPIFVGDRLKLHTLTAFMS 320
           G + +++P ++     G + KA++L  +G   ++   D ++ P  V     +H   A ++
Sbjct: 237 GGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHESSIHPAFALVA 296

Query: 321 MIGGIIVFGSAGLVIGPV 338
            + G +  G  G  +GP+
Sbjct: 297 FLMGPLALGITGFALGPL 314