Pairwise Alignments

Query, 356 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (319), Expect = 4e-34
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 23/335 (6%)

Query: 11  IATALGVSAATVSNALSGKGRVSAELAEKIRSVAAEIGYVPSQAGRALRTGKSAVIGLVL 70
           +A   G+S  TVS+ ++    VS E+  K+ +    + YVPS   R+L+   +A IGL++
Sbjct: 7   VAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTATIGLLV 66

Query: 71  PDISNPLFPQIAQAIEFAASSAGYGVLIADSRGDVAVQTRAIERLIERGVDGMVIVPRRG 130
           P+  NP F ++A+ IE      GY V++ +S  +   Q   +  L+E+ +DG++     G
Sbjct: 67  PNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLIFASAGG 126

Query: 131 -----TRIADVGCPVAVVD--TPSTPGNTVAADHWDGGRQIAEHLVGLGHRRLLILGNNP 183
                  +++V  P+ +VD        + V  DH  G      HL+ LGHR +  +G   
Sbjct: 127 DVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDIAFIGGPA 186

Query: 184 ASNVQNDRIGGLRSAMREGAQAETLWIERL---EQVHGKGCSLGLAGKVAEGVTAFAAVS 240
            ++V   R+ G   A++E      L +ER+   +     G        V +  +A  A +
Sbjct: 187 NTSVAQMRLAGYCRALKEA--GIELPVERMLESDFTSTGGYRAAAQLLVQQPPSAIFAAN 244

Query: 241 DLQALRALTELQRAGIHVPEQASVTGFDDLIWSPVVTPALTTIRMDMARIATLAVEALVQ 300
           D+  +  L       + VP + SV GFDD+  S  V PALTT+   + ++  +A E L++
Sbjct: 245 DMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAEVLLR 304

Query: 301 AIGAGEAEFPSHGRPVAATISK-VPMQLVVRQSTA 334
            I            P  AT  + V   +V+R+STA
Sbjct: 305 RIAT----------PGLATEQRIVTPSIVLRESTA 329