Pairwise Alignments

Query, 356 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (286), Expect = 3e-30
 Identities = 97/338 (28%), Positives = 150/338 (44%), Gaps = 24/338 (7%)

Query: 11  IATALGVSAATVSNALSGKGRVSAELAEKIRSVAAEIGYVPSQAGRALRTGKSAVIGLVL 70
           +A   GVS ATVS AL    +VS+   +++     E GY P+   R LR  +S  I  ++
Sbjct: 7   VAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIV 66

Query: 71  PDISNPLFPQIAQAIEFAASSAGYGVLIADSRGDVAVQTRAIERLIERGVDGMVIVPRRG 130
           PDI +P F +I + IE AA   GY VL+ DS      +   +  +  +  DGM+++   G
Sbjct: 67  PDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL---G 123

Query: 131 TRIA-DVGCP---------VAVVDTPSTPGNTVAADHWDGGRQIAEHLVGLGHRRLL-IL 179
           T +  DV  P         +A    P     TV  D+     +   +L  LGH+R+  I 
Sbjct: 124 TDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQIS 183

Query: 180 GNNPASNVQNDRIGGLRSAMREGAQAETLWIERLEQVHGKGC-SLGLAGKVAEGVTAFAA 238
           G   A+  Q    G  ++  R G      +    +     G  ++     + E  TA   
Sbjct: 184 GPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAIFC 243

Query: 239 VSDLQALRALTELQRAGIHVPEQASVTGFDDLIWSPVVTPALTTIRMDMARIATLAVEAL 298
            +D  A+ A+ E +R G+ VP+  SV GFDD+ ++    P LTTI      I   A+  +
Sbjct: 244 HNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMM 303

Query: 299 VQAIGAGEAEFPSHGRPVAATISKVPMQLVVRQSTATP 336
           ++ +          G  V A    +  +LVVR+S A P
Sbjct: 304 LELL---------RGHDVRAGSRLLETKLVVRESAAPP 332