Pairwise Alignments

Query, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 525 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  574 bits (1479), Expect = e-168
 Identities = 296/528 (56%), Positives = 401/528 (75%), Gaps = 7/528 (1%)

Query: 4   MKDSILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLA 63
           M ++++ +R L V F       + V  + LDVR GE LA+VGESGSGKS T   I+ LL 
Sbjct: 1   MSENLIEIRDLSVAF----NGQKVVSNLSLDVRRGECLALVGESGSGKSVTAHSILQLLP 56

Query: 64  KNGTVT-GSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVH 122
           ++GT+T GS  YRGQ+LVG   + L ++RG++I MIFQEPMTSL+PL+++ +QI E ++ 
Sbjct: 57  RSGTLTTGSITYRGQQLVGADDRTLRELRGNRIAMIFQEPMTSLNPLHSVAKQIGETLLL 116

Query: 123 HRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIAD 182
           HRG S +EA++R++ELLELVGI +P +R+ +YPHELSGGQRQRVMIAMALA EP++LIAD
Sbjct: 117 HRGVSGREAQKRIVELLELVGIQQPEKRLKAYPHELSGGQRQRVMIAMALACEPELLIAD 176

Query: 183 EPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMT 242
           EPTTALDVT+Q +IL LLK LQ+R  M+++LI+HDL +V   A RV VMR GE+VEQ   
Sbjct: 177 EPTTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQSDC 236

Query: 243 ADIFERPKGDYTRMLLEAEPSGRKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRA 302
             +F+ P+  Y+R+LL+AEP+G +  P D    +L+  N+ V +++ GG+ R      +A
Sbjct: 237 KSLFKSPQHPYSRLLLDAEPAG-EPLPRDTRETVLQVDNLKVWFSLTGGILRRHREYLKA 295

Query: 303 VDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLR 362
           VD ++L + +G+T+GIVGESGSGKSTLG+A+LRLL S G  RF    + G  +  MRP R
Sbjct: 296 VDDISLSIERGKTLGIVGESGSGKSTLGQAILRLLESRGSIRFRGQALDGLSQKQMRPWR 355

Query: 363 RQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPASRNR 422
           +++Q+VFQDPYGSLSPR +V +II+EGL VH    + A  D   I AL+EVG+DP SR+R
Sbjct: 356 KEMQVVFQDPYGSLSPRMSVAQIISEGLEVHS-QYNPAKCDAEVIRALEEVGIDPQSRHR 414

Query: 423 YPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSYIF 482
           YPHEFSGGQRQRIAIARA++LKP +++LDEPTSALDR+VQ QV+ LLR+LQEKHGL+Y+F
Sbjct: 415 YPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRELQEKHGLTYLF 474

Query: 483 ISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGAA 530
           ISHDL+VVKA++  VIV+K+G++VE G +  +F+AP+ PYT+ L+ AA
Sbjct: 475 ISHDLAVVKALAHDVIVVKDGKVVERGASHDVFEAPQHPYTQELLAAA 522