Pairwise Alignments

Query, 597 a.a., surface saccharide ABC transporter ATP-binding/membrane spanning protein from Sinorhizobium meliloti 1021

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (614), Expect = 8e-68
 Identities = 170/556 (30%), Positives = 287/556 (51%), Gaps = 19/556 (3%)

Query: 42  GLIIPMLGIIAGDGQANGLSGISAYFQAIGEGLGDGER--LLVIAAAVLALIVLKNILAF 99
           GL++  + ++        +  IS     + EG G+ E   L ++   +L L+ ++ +  F
Sbjct: 26  GLVVSTIALVINAAADTYM--ISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGF 83

Query: 100 ANTLLTTFIYGKASHAIRSALSDQLLRIGYPFFMQQSPGRLLNIISNESWRASDAIQTVL 159
           A++   +++ G     +R  L +  + +   FF Q+S G LL+ I+ +S + + A    L
Sbjct: 84  ASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRAL 143

Query: 160 SSIVHGSAAVI-LLAFLLLMSWQMTLFVALGLVFVQLAHAALSATLKGPSRHVTSFNSEL 218
            SIV   A++I LL  +   SWQ++L + +    V  A + +S   +  SR++ +    +
Sbjct: 144 VSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHV 203

Query: 219 AARMLHLVHAGRLIRVFGQETREKNAFDSASDAVRRAGFALQSRQGALPPLTEVLHS--- 275
            +    ++   +++  +G +  E+  FD  S+++R+    L S Q    P+ +++ S   
Sbjct: 204 TSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLAL 263

Query: 276 --ALFLAVVVSAWSIGVSFPVIVAFVVLLYRLQPHMRALQMSWSQIQGWSGSLEEVRWLL 333
              LFLA V S  +        V F  +   ++P ++AL    S+ Q    + + +  L+
Sbjct: 264 FAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRP-LKALTSVTSEFQRGMAACQTLFGLM 322

Query: 334 DSSDKPKAPQGNAPVDGLHQGMTFDRVTFRYPGSEVRPLVLHSASFEIRSGRSTAIIGRS 393
           D   + +   G    + ++  +    VTF Y G E +P + H  SF I  G++ A++GRS
Sbjct: 323 DL--ETERDNGKYEAERVNGEVDVKDVTFTYQGKE-KPALSH-VSFSIPQGKTVALVGRS 378

Query: 394 GAGKTTIVNLLCRFVEPDEGRILVDGVPLGQINPVQWRRQIAVASQDLELVDGTILENIT 453
           G+GK+TI NL  RF + D G I +DG  +        RR  A+ SQ++ L + TI  NI 
Sbjct: 379 GSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIA 438

Query: 454 YGQSA--TPAEAERAAKLAEAHGFIEQLPQGYETLVGYRGASLSAGQRQRIALARALVRD 511
           Y      T  + E+AA+ A A  FIE +PQG +T++G  G SLS GQRQR+A+ARAL+RD
Sbjct: 439 YAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRD 498

Query: 512 PAILILDEATNAVDGLSEAAIVETLRSRAGRRTTIVISHHRSTISFCDDVVVLGSGRVKG 571
             +LILDEAT+A+D  SE AI   L      +T +VI+H  STI   D+++V+  G +  
Sbjct: 499 APVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIE 558

Query: 572 QAALADVASLSMDQLY 587
           +   AD+  L+ D  Y
Sbjct: 559 RGRHADL--LAQDGAY 572