Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 293 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  112 bits (281), Expect = 8e-30
 Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 9/290 (3%)

Query: 4   RRSTIIFAWVLLL---PAVFYVTVIVAYPLVDTFVLS-FTDASLKKTTKWVGTANYDKIF 59
           +R T    W+ LL   P +    +   YP       S F       + +WVG  N++ +F
Sbjct: 3   KRVTFKGLWLPLLLVAPQIVITALFFFYPAGQAIWQSLFIPDPFGLSMQWVGLGNFEFLF 62

Query: 60  NATFAEV-ILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGI 118
           +  F     + T V++     + M +  + A++ +  + G   +R L + P+ V  A+  
Sbjct: 63  SDPFYRASFVTTAVFSILVTVVSMGVALYLALLADRLIKGSGTYRTLLIWPYAVAPAVAG 122

Query: 119 FMWGWMYNGQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLAS 178
            +W +M+N + G+++  L   G     V    +   A    +V   W  +    L+ LA 
Sbjct: 123 VLWLFMFNTRVGVVTWYLGQLGYDWNHVL---NEEEAMGLVVVASAWGRISYNFLFFLAG 179

Query: 179 MQAIPQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLI-ATFNSFDIIWILTQG 237
           +QAIP+ + EAA  DGA  + RFR I  PLL P    + ++++I A F +F +I  +T G
Sbjct: 180 LQAIPKSVIEAAAIDGARFWTRFRTIVFPLLSPVTFFLLVVNIIYAFFETFGVIHTITSG 239

Query: 238 GPNGDTTTMIIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRVTHR 287
           GP   TT ++   Y      +  G  AA++V++ + +SI  +  F+   R
Sbjct: 240 GPQQATTILVYKVYSDGFVGQDLGSSAAQSVVLLVLVSILTVIQFKYVER 289