Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  109 bits (272), Expect = 9e-29
 Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 6/278 (2%)

Query: 13  VLLLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANYDKI-FNATFAEVILRTF 71
           + L+P + +  V V  P+  +F +S  +       ++VG  NYD++ ++  F   +    
Sbjct: 29  LFLIPGILFFAVYVIIPIFQSFQISLLEWDGLGEPEFVGLRNYDELRYDDAFYTSLKNNI 88

Query: 72  VWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGIFMWGWMYNGQFGM 131
           +W A  + + +  G F A+ LN  V G  L++ L   P+++   +   ++ W Y+  FGM
Sbjct: 89  IWLALYL-LAIPAGLFIALFLNQTVTGIRLYKSLFFFPFVISQVVVGLVFTWFYDPNFGM 147

Query: 132 ISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQAIPQDLYEAAW 191
           ++  L   GL  GP+A L          I   +W       +  L  + A+  +  EA  
Sbjct: 148 LNTMLGWVGL--GPIAVLGDERYVTIGIIAAGLWPQTAYCMILYLTGLNAVDPEQIEAGR 205

Query: 192 TDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPNGDTTTMIIDTY 251
            DGA  +     + LP L P+     ++++I    SFD+I I+TQGGP G +  +    +
Sbjct: 206 LDGAKGWRMLWHVVLPQLRPATFIAFVVTIIGALRSFDLISIMTQGGPFGSSRVLSFYMF 265

Query: 252 RTAIGSK--KYGEGAARAVLICIFLSIFCIAYFRVTHR 287
             A+     + G GAA AV++ + + +F   +    +R
Sbjct: 266 EVALSEYGFRMGYGAAIAVVLFLIMMVFITGFLVKMYR 303