Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 283 a.a., Histidine ABC transporter, permease protein (TC 3.A.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 20/204 (9%)

Query: 184 WTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243
           W +  + + L L +   + ++G+PLGIL  R  RLR+ ++ +L+ +QT+PS     + + 
Sbjct: 89  WDKLMQTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPSF----VYLI 144

Query: 244 PLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIG 303
           P+            + + G+G  PA  A  +Y+  P++  T +G+  V     +A    G
Sbjct: 145 PV------------LMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFG 192

Query: 304 MTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDL 363
               Q+L  ++ PLA P I+ GI    +  + +  IA++IG  G G  V  G+    +  
Sbjct: 193 ANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNVGR 252

Query: 364 VLLGAIPTVVLAFTAAIVLDALIE 387
            L   +  V+L    A+V+D + +
Sbjct: 253 GLEAGLAIVIL----AVVIDRITQ 272