Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 209 a.a., quaternary ammonium transporter from Pseudomonas fluorescens FW300-N2C3

 Score = 92.8 bits (229), Expect = 8e-24
 Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 20/196 (10%)

Query: 184 WTEAGR----HVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFG 239
           W + G+    H+ L    L    ++   + +L      L   ++ +   + TIPS+ALF 
Sbjct: 11  WQQIGQLLFDHIQLVTLGLFIGMLLAGAMVLLTLWKPGLAQPMIYISGILFTIPSLALF- 69

Query: 240 ILIAPLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAA 299
           ILI P                 G+    A + L LY+LL V+ NT+ GLA  P    + A
Sbjct: 70  ILIMPF---------------TGLSKTTAVIGLSLYALLIVLQNTLAGLASNPPDVLEEA 114

Query: 300 RGIGMTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQT 359
           R +G T  QR + +E PLA P +L G+R   V  +GL T+ ALIG GG G     G+ Q+
Sbjct: 115 RALGYTRMQRFLGVELPLALPSLLAGLRTTAVTLVGLVTVTALIGQGGLGQLFITGLAQS 174

Query: 360 AMDLVLLGAIPTVVLA 375
               V +  + TV+LA
Sbjct: 175 FTTPVAVSLVLTVMLA 190