Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 357 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (249), Expect = 7e-26
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 20/204 (9%)

Query: 184 WTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243
           W+EA   ++L L S+     +GLP GIL  R +RL      +L+A+QT P+     + + 
Sbjct: 126 WSEAMLTLSLVLTSVMFCIALGLPSGILMARSDRLAKLSRPLLDAMQTTPAF----VYLV 181

Query: 244 PLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIG 303
           P+            + + GIG  P  V   +++L P++  T +G+  VP    +AAR  G
Sbjct: 182 PI------------VMLFGIGNVPGVVVTIIFALPPLIRLTNLGIRQVPEDLVEAARSFG 229

Query: 304 MTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDL 363
            +  Q L  ++ PLA P I+ GI   L+  + +  IA++I  GG G  V +G+G+  M L
Sbjct: 230 ASKTQLLTKVQLPLALPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGL 289

Query: 364 VLLGAIPTVVLAFTAAIVLDALIE 387
             +G +  V+L    AI++D L +
Sbjct: 290 ATVGGVAIVLL----AILIDRLTQ 309