Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 260 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (275), Expect = 5e-29
 Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 18/188 (9%)

Query: 190 HVTLALGSLAAATIVGLPLGILC-HRVERLRAGVLNVL-NAIQTIPSIALFGILIAPLGW 247
           H+ +   +   +T++ LPL ++   R  R   G+   L N  QT P +A+  +++  +G+
Sbjct: 58  HLRIVALAATLSTLIALPLAVIVTRRAGRAFFGLSRALVNLGQTFPPVAVLAVMVPLVGF 117

Query: 248 IAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDR 307
                           GA PA +ALFLY LLP+  NT+ GL  VP A  DAARG+GM   
Sbjct: 118 ----------------GAKPALIALFLYGLLPIFENTLAGLTQVPAAVLDAARGMGMGPL 161

Query: 308 QRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLG 367
            RLV IE PLA P+IL GIR+  + N+G ATI + +   G G  +  G+       +L G
Sbjct: 162 TRLVRIELPLALPLILEGIRVSTIINLGTATIGSTVAAPGLGEVIIAGLLSNNTAFLLQG 221

Query: 368 AIPTVVLA 375
            +   +LA
Sbjct: 222 GLLVALLA 229