Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis JJ

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 184 WTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243
           W  +   ++L + S   A ++G+PLGI+  R + +   +  +L+ +QT+PS+A       
Sbjct: 87  WDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYL----- 141

Query: 244 PLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIG 303
                   +P   A+   GIG  P  +A  ++++ P +  T +G+  V +   +  R  G
Sbjct: 142 --------IP---AVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFG 190

Query: 304 MTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDL 363
            T  Q L  IE P A P I+ G+   ++ +  +  IA  IG GG G  +  G+ + ++  
Sbjct: 191 GTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAP 250

Query: 364 VLLGAIPTVVLA 375
            L   I    LA
Sbjct: 251 ALEAGIAVTFLA 262