Pairwise Alignments

Query, 219 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  110 bits (275), Expect = 2e-29
 Identities = 65/219 (29%), Positives = 121/219 (55%), Gaps = 20/219 (9%)

Query: 4   SFLDQLWLARIPLLKGLGVSVSISLLSIVVGTVLGVFVGLALVYGFRPVKWIVRGYTDFI 63
           SF+D  WL     L+ +GVSV       + G ++ V +G+A       V+ +  GY  F 
Sbjct: 12  SFIDGAWLT----LQLVGVSV-------IAGLIVAVPLGIARSSRHLAVRALPYGYIFFF 60

Query: 64  RGTPVLVLVLASYYVLSTIGIDL---------GPFQAGVLALAVFCSSHVGELVRGALQS 114
           RGTP+LV +   YY ++   +            P+   ++ + +  ++++ E++RGA+Q+
Sbjct: 61  RGTPLLVQLFLVYYGMAQFDVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQN 120

Query: 115 IPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSELLL 174
           +P G+ EAA+A+G++ +Q   +++ P+A R  LPA+ N    M+KAS L S I + EL  
Sbjct: 121 VPHGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTG 180

Query: 175 RTQELISRTFMSLEFYFFAGFLYFVINYGIERFGRYVER 213
             +++ +RT++  E +  AG +Y +I + + +  + +ER
Sbjct: 181 MARKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLER 219