Pairwise Alignments

Query, 280 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 282 a.a., ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  391 bits (1004), Expect = e-113
 Identities = 188/278 (67%), Positives = 223/278 (80%), Gaps = 1/278 (0%)

Query: 3   SRFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQGF 62
           S F       AA +AA+   AQ A SKLD VL RG LI+GTGSTNAPWHF+ A+ KLQGF
Sbjct: 6   SLFKTCVFLFAATVAAVGV-AQAADSKLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGF 64

Query: 63  DVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGERAQQIAFTIP 122
           D+D+ R++AK LF DPEK+EFV QSSDARIPN+ T KVD++CQF+TVT  RAQQ+AFT+P
Sbjct: 65  DIDIARMVAKGLFNDPEKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLP 124

Query: 123 YYREGVGLMLKADGKYADYEALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDL 182
           YYREGVGL+L A+ KY + E LKAAG  VT++VLQNVYAE++VH ALP+A VDQY+SVDL
Sbjct: 125 YYREGVGLLLPANSKYKEIEDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDL 184

Query: 183 IYQALESGRADAAATDQSSLAWYMTQNSGRYKDAGYGWNPQTYACGVRRGDQDWLNFVNT 242
           +YQA+ SGRADAAATDQSS+ + M QN GRY+   Y W+PQTYAC V+RGDQDWLNFVNT
Sbjct: 185 MYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNT 244

Query: 243 ALHEAMTGVEFDFYAKSFKTWFGKDLTPPHIGFPIEYK 280
            LHEAMTGVEF  YA SFK WFG +L  P IGFP+E+K
Sbjct: 245 TLHEAMTGVEFPTYAASFKQWFGVELPSPAIGFPVEFK 282