Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 323 a.a., sugar ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  120 bits (302), Expect = 3e-32
 Identities = 78/292 (26%), Positives = 144/292 (49%), Gaps = 17/292 (5%)

Query: 4   SKLSAPTLLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNA 63
           +K   P + + PA + L+ +++LP + ++Y SF   R         F+G +NYV   T+ 
Sbjct: 38  NKRILPWVYVTPALLFLSAYLILPTLETVYLSFFDGRSRN------FVGLKNYVFAFTDH 91

Query: 64  EFWVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQF 123
              VAF   +L L +     + LGL +A+LV+K  Y +   ++ +  PM  S V     +
Sbjct: 92  TMLVAFRNNLLWLVLVTGISVSLGLIIAVLVDKVRY-EAIAKSIIFLPMAISFVGASVIW 150

Query: 124 KFLFN------DNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILI 177
           KF++       + IG +N  + SLG     + WL++ ++  F++I   +W  T    +++
Sbjct: 151 KFVYAYRPAGAEQIGLLNAIVTSLGFAP--VGWLVERSVNNFALIAIMIWLYTGFCMVIL 208

Query: 178 LAGLLAMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMT 237
            A +  +P D +EAA +DG   WQ F  +T P +     +  T   + V + +DIV +MT
Sbjct: 209 SAAVKGIPADVIEAARIDGANSWQIFWRITIPMIRSTLLVVSTTMVILVLKVFDIVFVMT 268

Query: 238 DGGPAKRTELLWTLIGRTAYGDARMGMANAMAYVAILLSIFFTVYFFRKLAA 289
            G   + TE++ +L+ +  +     G  + +A + +LL +   +   R+  A
Sbjct: 269 GGN--QGTEVIASLMIKEMFNYRNFGRGSTIAVILLLLIVPVMITNIRRFKA 318