Pairwise Alignments

Query, 439 a.a., ABC transporter for L-Fucose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 460 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 90/429 (20%), Positives = 183/429 (42%), Gaps = 38/429 (8%)

Query: 27  LPGK-FEGVTIDAKLIGGQQYEKLYERIGEWEKATGAKVNILSKKNHFELDKEIKSDIAT 85
           LPGK FEG T++   +   Q++ L  R  E+ + TG +            +K     IA 
Sbjct: 53  LPGKPFEGTTLNILSVVTPQFDGLMLRDEEFTELTGIETEWTFIPFGSLQEKINAEGIAA 112

Query: 86  GGLTWCVGSNHSSFAPQYPDIYADLFGLIPSEEVA--KFVPAVIDASTLEGKLVMLPRAQ 143
            G T+ V +   S+ P        +  L+  + ++  ++  A   ++  EG+ +  P  +
Sbjct: 113 NG-TFDVVNYLDSWGPPNAHWLKRIDELMARDGISMDRYPAAFARSAQFEGETLGFP-LR 170

Query: 144 FDVSALYFQKSLYQDEAKKTEFKAKYGYDLAPPDTWAQVS------DQAEFFAAPPNFYG 197
                ++++K L  +                PP+TW  V        +     AP   Y 
Sbjct: 171 AHPQLMFYRKDLIPE----------------PPETWEDVIRIGKELKETNPDIAPLALYY 214

Query: 198 TQFAGKEEAINGRFYEMLVAEGGEYLDKDGRPAFNSDAGVRALEWFVKLYKDKAVP-PGT 256
                ++      +   L A G +  ++DG  A+ +  G++A + +++L+    +  P +
Sbjct: 215 NNDGNRQNLFI--WLNFLWAAGADIFNEDGTAAWATPEGIQATKDYIELHTVHQITNPNS 272

Query: 257 TNYLWDDLGQGFASGSIAVN-LDWPGWASFFNDPKSSKVAGNVGVKVQPAGSSGKRTGWS 315
             ++  D  Q F  G+ A+  + W  ++ F+N   S+     VG    P+     +T ++
Sbjct: 273 LAFVEQDARQSFMQGNSAMMPVWWWAYSGFYNPDSSTLTKDQVGFTGMPSYKGVTKT-YA 331

Query: 316 GHHGFSVTESCADKEAAASLVWWLTNEDSQKLESAAGPLPTRSAVWDF-----NIKAAEG 370
               FS++E   ++EAA   + WL+N +  K  +    +  ++ + +      +++  E 
Sbjct: 332 ISMPFSISEYSENQEAAWEFLKWLSNPEMDKANAIEREVGGKTIINNVVTHISSLQDPEV 391

Query: 371 DAYKTEVLQAFQEAAKHAFPVPQTAEWIEISNAVYPELQAAILGDKTSKEALDAAAEKAT 430
           +A    +  A  E+ K +  +PQ  EW E+ + +   +  A  G    +E + AAA++A 
Sbjct: 392 NAANDGIQAAAWESLKESDIMPQIPEWSEVGDILSAAIAEAAAGGDV-EELMTAAADRAD 450

Query: 431 GILEDAGKL 439
            +L  AG++
Sbjct: 451 RVLRRAGRI 459