Pairwise Alignments

Query, 1539 a.a., conjugal transfer protein from Sinorhizobium meliloti 1021

Subject, 615 a.a., exodeoxyribonuclease V, alpha subunit from Pseudomonas stutzeri RCH2

 Score = 58.2 bits (139), Expect = 3e-12
 Identities = 109/431 (25%), Positives = 162/431 (37%), Gaps = 62/431 (14%)

Query: 392 DLEQVDAVRHVTRDNAIAAVVGLAGAGKSTL---LAAARAAWEGEGRRVIG-AALAGKAA 447
           D +++ A + V R   +A + G  G GK+T    L AA     G  R  IG AA  GKAA
Sbjct: 145 DWQRLAAAQAVRR--RLAVISGGPGTGKTTTVVRLLAALLEQPGGERLAIGLAAPTGKAA 202

Query: 448 -----------------EGLEDSSGIRSRTLASWELAWESGREQLQRGD--------VLV 482
                            + ++D+    +RTL    L    G     R D        VLV
Sbjct: 203 ARMAEAIRNAKAELPVSDAVKDALPDEARTLH--RLLGSRGDSPRVRHDAANPLALDVLV 260

Query: 483 IDEAGMVSSQQMARVLKAVEDAGAKAVLVGDAMQLQPIEAGAAFRAISERIGFAELAGVR 542
           +DEA MV    MA+++ A+    A+ +L+GD  QL  +EAGA F  + E  GF       
Sbjct: 261 VDEASMVDLALMAKLVAALPPK-ARLILLGDKDQLAAVEAGAVFAELCEGRGFDSQEAAD 319

Query: 543 RQRDAWARDASRLFARGKVEEGLDAYAQQGRIVETETRAEIVDRIVADWANARRDLLQKS 602
            QR    ++      R ++ + +       R        E+  RI    A     LLQ+ 
Sbjct: 320 LQR-ITGQNVPVETPRSRLGDAVVLLTHSHRFAGDSGIGELARRINGGDAKGTVALLQEG 378

Query: 603 ADGEHPGRLRGDELLVLAHTNDDVRKLNEALRNVMIGEGALTGAREFQTARGLREFAAG- 661
              +           ++           +A+R       A      F+     RE A G 
Sbjct: 379 RP-DLAWNAAPSPAALIERLEQGYAPYLQAVRQA-DPSAAFEAFNGFRALTAQREGAFGV 436

Query: 662 DRIIFLENARFVEPRARRLGPQYVKNGMLGTVV-------STGDRRGDTLLSVRLDSGRD 714
             I     ARF     RRLG    +    G  V       + G   GD  L +R + G  
Sbjct: 437 TGINEALEARF----KRRLGVPARERWYPGRAVMVRQNDYALGLFNGDIGLCLRTEQGLR 492

Query: 715 VVI-SQDSYRNV--------DHGYAATIHKSQGSTVDRTFVL----ATGMMDQHLTYVAM 761
           V     D YR          D  +A T+HKSQGS      +      + ++ + L Y  +
Sbjct: 493 VFFEGDDGYRGFAPARLPSHDSAFAMTVHKSQGSEFAEVLLALPEQPSPLLTRSLFYTGI 552

Query: 762 TRHRDRADLYA 772
           TR + + +++A
Sbjct: 553 TRAKRKVEIWA 563