Pairwise Alignments

Query, 517 a.a., PST type surface saccharide translocase, ExoT protein from Sinorhizobium meliloti 1021

Subject, 472 a.a., Polysaccharide biosynthesis protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  111 bits (277), Expect = 7e-29
 Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 20/381 (5%)

Query: 60  VAM-FAVFVILARHLGPEEFGLATLAMIAPTILATVVTRGIPDALVQRAEIEPIHLDSAF 118
           VAM FA   ILAR L P E G+  +A     +  T+   G    L+Q  E+ P  + SAF
Sbjct: 8   VAMGFASVTILARLLTPAEVGVFGVAYSVVGLSQTLRDFGTSSYLIQEKELTPQRIRSAF 67

Query: 119 WLLVATGATLSALIWAFAGVVAEAFGEPLLEDLVRWTGIIVVVQSLAAVPTAVLKRELNF 178
            + + TG TL   I+  A  +A  +G+P L  ++R   + +V+    +   ++L+R++ F
Sbjct: 68  GVTLLTGWTLGGTIFLLADTIAAFYGQPELATVLRIICLTLVLWPFGSPILSLLRRDMRF 127

Query: 179 RLFTLRTLTGTMVGGTVGLTMAIAGYGMWSLVLMQVAKAIVETTVILLGSSWRPRMAYSY 238
           +  T   +   +   TV + +   GY  + L    VA+  V    +LL +  RP+  + +
Sbjct: 128 KTLTFIGMATALAQPTVAVILVYLGYSYYGLAWAVVAEVAVS---VLLTTILRPKETWMW 184

Query: 239 ARCRE-----LFG--FAGPVIVQTLWTFVNEEIPKVILGLFLGPVAVGVYAIARRPLDLL 291
              RE     +FG   AG  ++ +L T+ ++    ++LG  LG V  G Y+ A   + L 
Sbjct: 185 PSLREWRRVGVFGLSMAGISLIGSLNTYASD----LVLGRTLGFVNSGFYSRATGLISLF 240

Query: 292 GEFLLGPLAAITMPAVARVQREPDKIDHFFNTSVRMAAIAGFPAFVGFAAIAPVAVPLVF 351
            + + G   A+ M   AR+ RE   +   F  +  M     +P F   A +A   V ++F
Sbjct: 241 RDRIWGGGHAVLMSEFARLHREDGDVKGSFLRASVMVTGIFWPLFALLALMALPVVRILF 300

Query: 352 GPQWASAVVAVQILMILGLQRTIDSLCAYTILALGHSKLVLKLNMTYT---LFSLVLLT- 407
           G  W  +V  V++L    +           +LA GH  L L+L++      + +L+LL+ 
Sbjct: 301 GLNWDDSVPLVRLLAGAAMISVPWFPGGTLLLATGHVNLQLRLSVVMVAVQIPALILLSH 360

Query: 408 -AAAQISLEAVIAALVACNLL 427
                + L +V+  LV   +L
Sbjct: 361 LGLIWVPLVSVLTGLVMAGML 381