Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 554 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  367 bits (943), Expect = e-106
 Identities = 231/561 (41%), Positives = 327/561 (58%), Gaps = 32/561 (5%)

Query: 9   PLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEF 68
           PLL +  L +      A    L  +   +  GE +GI+GESG+GKS    AI GLL P+ 
Sbjct: 4   PLLEIRQLQICFGEAIA----LQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLL-PKT 58

Query: 69  QQTSGTIEFDGKA----IDGMTADERET--LRGRRISAIFQDHTASLDPLMSVGAQVEET 122
            + SG I F   A     D +T  ERE   LRG R+  IFQ+  +SL+P+ S G Q+ E 
Sbjct: 59  ARCSGQIAFRSVAGQSSRDLLTLPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEA 118

Query: 123 CLALDSSLSRREARARAIDLLARVG-IPEPERR---YRNYPHQFSGGQRQRVVIAIALAG 178
            +     LS+ EA+ R I LL  V  I EP +     R YPHQ SGGQRQR++IAIALA 
Sbjct: 119 -IQQHLPLSQAEAQQRVIALLQEVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAA 177

Query: 179 SPDIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKG 238
           +PD+++ADEPT+ALDATVQ  VL+LL+ L  +  +++I V+HD+GVI+E+ +RV+V+ +G
Sbjct: 178 NPDLLLADEPTTALDATVQASVLQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRG 237

Query: 239 QVVEADRTTAILDQPRHDYTKKLLAAVPRLR-----IPTRTAKAEDNGRQADSPAIDSDQ 293
           QVVE  R   +L+ P+H YT+ L+A  P++      +PT     E        P      
Sbjct: 238 QVVEQGRVADVLNSPQHPYTQGLVACRPQINPRSCYLPTVADFLEGQTEPRSLPPRSPAT 297

Query: 294 NPLLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRI 353
            PLL  E L   +         GR      ++++   L  G   G+VGESG GK++  R 
Sbjct: 298 QPLLQVEQLGITYR--------GRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLARC 349

Query: 354 LAGLDTAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIR 413
           L GL  A  G+I + + P D+  S  R  L   VQM+FQDP+ +L+PR T+G  + E +R
Sbjct: 350 LVGLVPASEGQIWLDQQPLDLRSSRDRQRLRQTVQMVFQDPAAALDPRWTVGSAILEPLR 409

Query: 414 F--GARIRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVA 471
                R R+ ++   L   + R+ LP  +  R+PH+ SGGQ+QR+CIARAL+ +P +++ 
Sbjct: 410 IKQPRRDRTADQRL-LKQWLQRVDLPTDIGDRYPHEFSGGQRQRICIARALIGQPRLLIC 468

Query: 472 DEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGP 531
           DE  SALDVSVQA+I+ LLK   AE  +T +FISHDLA+V+ M   + +   G++E+  P
Sbjct: 469 DESVSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDSP 528

Query: 532 TEFIFSRSDNPYTRALINARP 552
           TE +F R  + YTR LI A P
Sbjct: 529 TEQLFQRPQSDYTRRLIAAIP 549



 Score =  176 bits (446), Expect = 2e-48
 Identities = 99/260 (38%), Positives = 154/260 (59%), Gaps = 7/260 (2%)

Query: 7   TTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSP 66
           T PLL+VE LG+ +   S     + ++SF L  G  LG++GESG GKS++   ++GL+  
Sbjct: 297 TQPLLQVEQLGITYRGRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLARCLVGLV-- 354

Query: 67  EFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLAL 126
               + G I  D + +D  ++ +R+ LR + +  +FQD  A+LDP  +VG+ + E     
Sbjct: 355 --PASEGQIWLDQQPLDLRSSRDRQRLR-QTVQMVFQDPAAALDPRWTVGSAILEPLRIK 411

Query: 127 DSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIAD 186
                R   +      L RV +P        YPH+FSGGQRQR+ IA AL G P ++I D
Sbjct: 412 QPRRDRTADQRLLKQWLQRVDLPTDIG--DRYPHEFSGGQRQRICIARALIGQPRLLICD 469

Query: 187 EPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRT 246
           E  SALD +VQ Q+L LLK L  E G++ + ++HD+ V+  +++R+LVM +GQ+ E   T
Sbjct: 470 ESVSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDSPT 529

Query: 247 TAILDQPRHDYTKKLLAAVP 266
             +  +P+ DYT++L+AA+P
Sbjct: 530 EQLFQRPQSDYTRRLIAAIP 549



 Score =  137 bits (344), Expect = 1e-36
 Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 16/246 (6%)

Query: 324 LRDVGIRLARGSITGIVGESGSGKTTFGRILAGL---DTAPTGRITI----GEHPFDVSQ 376
           L+ + + +  G   GIVGESGSGK+     + GL       +G+I      G+   D+  
Sbjct: 21  LQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLPKTARCSGQIAFRSVAGQSSRDLLT 80

Query: 377 SGRRS--GLLG-RVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDR 433
              R    L G R+  IFQ+P  SLNP  + G  L E+I+    +   E    + A++  
Sbjct: 81  LPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEAIQQHLPLSQAEAQQRVIALLQE 140

Query: 434 LGLPRS------LLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIV 487
           + L R       +L R+PHQLSGGQ+QR+ IA AL A P++++ADEPT+ALD +VQA ++
Sbjct: 141 VQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAANPDLLLADEPTTALDATVQASVL 200

Query: 488 QLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRAL 547
           QLL+    +R M M+F+SHDL ++  +   V +   G++ + G    + +   +PYT+ L
Sbjct: 201 QLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRGQVVEQGRVADVLNSPQHPYTQGL 260

Query: 548 INARPQ 553
           +  RPQ
Sbjct: 261 VACRPQ 266