Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Klebsiella michiganensis M5al

 Score =  333 bits (853), Expect = 1e-95
 Identities = 204/553 (36%), Positives = 308/553 (55%), Gaps = 37/553 (6%)

Query: 6   VTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLL- 64
           +T PLL ++NL +       TT ++S++S ++  GE L ++GESG+GKS    ++L LL 
Sbjct: 1   MTQPLLDIDNLSIAFRQQGETTSVVSELSLQIAVGETLALVGESGSGKSVTALSVLRLLP 60

Query: 65  SPEFQQTSGTIEFDGKAIDGMTADERET--LRGRRISAIFQDHTASLDPLMSVGAQVEET 122
           SP     +G I F G+++  + ADER    +RG RI+ IFQ+   SL+PL ++  Q+ E 
Sbjct: 61  SPPVSYPTGDIRFHGQSL--LHADERTLRGVRGNRIAMIFQEPMVSLNPLHTLEKQLYEV 118

Query: 123 CLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDI 182
            L+L   + +  AR   +D L RVGI    RR  +YPHQ SGG+RQRV+IA+AL   P++
Sbjct: 119 -LSLHRGMRKEAARGEILDCLERVGIRNAPRRLADYPHQLSGGERQRVMIAMALLTRPEL 177

Query: 183 IIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVE 242
           +IADEPT+ALD +VQ Q+L LL+ L  E  + ++ +TH++ ++ ++ +RV VM+ G+ VE
Sbjct: 178 LIADEPTTALDVSVQAQILTLLRELKQELNMGLLFITHNLSIVRQLADRVAVMQNGRCVE 237

Query: 243 ADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGL 302
            +   A+   P H YT++LL + P                  D   +  D   LL AE L
Sbjct: 238 QNGCQALFFAPEHPYTRRLLDSEP----------------SGDPVPLAPDAPVLLRAENL 281

Query: 303 SKQFAPQGFAWGIGRGKPR------FGLRDVGIRLARGSITGIVGESGSGKTTFGRILAG 356
           S        A+ I +G  R        +  V   L  G   G+VGESGSGK+T G  L  
Sbjct: 282 S-------IAFPIRKGLLRRVVDHNRVVNAVSFHLRAGETLGLVGESGSGKSTTGLALLR 334

Query: 357 LDTAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIR-FG 415
           L     G I             +   L  R+Q++FQDP+ SLNPR+ + + ++E +R   
Sbjct: 335 L-IHSAGAIAFDGEALQGRNRQQMLPLRRRMQVVFQDPNSSLNPRLNVLQIIEEGLRVHQ 393

Query: 416 ARIRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPT 475
             +   E    +   M  +GL      R+P   SGGQ+QR+ IARAL+ +P++IV DEPT
Sbjct: 394 PTLTPAEREQAVIQAMQEVGLDPQSRHRYPAAFSGGQRQRIAIARALVVKPQLIVLDEPT 453

Query: 476 SALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFI 535
           S+LD +VQA+I+ LLK    +  +  +FISHDL +V+A+C  V + + G + + G  E +
Sbjct: 454 SSLDKTVQAQILALLKTLQQKHQLAYIFISHDLRVVRALCHQVMVLRQGEVVEQGECERV 513

Query: 536 FSRSDNPYTRALI 548
           F+     YTR L+
Sbjct: 514 FTAPQQEYTRQLL 526



 Score =  175 bits (444), Expect = 3e-48
 Identities = 106/263 (40%), Positives = 157/263 (59%), Gaps = 19/263 (7%)

Query: 10  LLRVENLG---------LRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAI 60
           LLR ENL          LR V       +++ VSF L  GE LG++GESG+GKST G A+
Sbjct: 275 LLRAENLSIAFPIRKGLLRRVVDH--NRVVNAVSFHLRAGETLGLVGESGSGKSTTGLAL 332

Query: 61  LGLLSPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVE 120
           L L+      ++G I FDG+A+ G    +   LR RR+  +FQD  +SL+P ++V   +E
Sbjct: 333 LRLI-----HSAGAIAFDGEALQGRNRQQMLPLR-RRMQVVFQDPNSSLNPRLNVLQIIE 386

Query: 121 ETCLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSP 180
           E       +L+  E     I  +  VG+ +P+ R+R YP  FSGGQRQR+ IA AL   P
Sbjct: 387 EGLRVHQPTLTPAEREQAVIQAMQEVGL-DPQSRHR-YPAAFSGGQRQRIAIARALVVKP 444

Query: 181 DIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQV 240
            +I+ DEPTS+LD TVQ Q+L LLK L  +  ++ I ++HD+ V+  + ++V+V+R+G+V
Sbjct: 445 QLIVLDEPTSSLDKTVQAQILALLKTLQQKHQLAYIFISHDLRVVRALCHQVMVLRQGEV 504

Query: 241 VEADRTTAILDQPRHDYTKKLLA 263
           VE      +   P+ +YT++LLA
Sbjct: 505 VEQGECERVFTAPQQEYTRQLLA 527



 Score =  154 bits (389), Expect = 8e-42
 Identities = 98/267 (36%), Positives = 153/267 (57%), Gaps = 18/267 (6%)

Query: 295 PLLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFG--- 351
           PLL  + LS  F  QG    +        + ++ +++A G    +VGESGSGK+      
Sbjct: 4   PLLDIDNLSIAFRQQGETTSV--------VSELSLQIAVGETLALVGESGSGKSVTALSV 55

Query: 352 -RILAGLDTA-PTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETL 408
            R+L     + PTG I   G+      +   R     R+ MIFQ+P VSLNP  T+ + L
Sbjct: 56  LRLLPSPPVSYPTGDIRFHGQSLLHADERTLRGVRGNRIAMIFQEPMVSLNPLHTLEKQL 115

Query: 409 DESIRFGARIRSGEEPADLAAMMDRLGL---PRSLLGRHPHQLSGGQKQRVCIARALLAR 465
            E +     +R      ++   ++R+G+   PR L   +PHQLSGG++QRV IA ALL R
Sbjct: 116 YEVLSLHRGMRKEAARGEILDCLERVGIRNAPRRLAD-YPHQLSGGERQRVMIAMALLTR 174

Query: 466 PEIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGR 525
           PE+++ADEPT+ALDVSVQA+I+ LL++   E  M ++FI+H+L+IV+ +   V + ++GR
Sbjct: 175 PELLIADEPTTALDVSVQAQILTLLRELKQELNMGLLFITHNLSIVRQLADRVAVMQNGR 234

Query: 526 IEDFGPTEFIFSRSDNPYTRALINARP 552
             +    + +F   ++PYTR L+++ P
Sbjct: 235 CVEQNGCQALFFAPEHPYTRRLLDSEP 261