Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 693 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  329 bits (843), Expect = 2e-94
 Identities = 204/606 (33%), Positives = 316/606 (52%), Gaps = 63/606 (10%)

Query: 9   PLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEF 68
           P+L +ENL +   +     P + D S  +  GE +G++GESG GKSTV   ++  L    
Sbjct: 8   PILEIENLSISFFTRLREIPAVMDFSCTVMPGEAMGLVGESGCGKSTVALGVMQDLGVNG 67

Query: 69  QQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDS 128
           +   GTI+F G+ ++ M+ +E   +RG+ I+ I+Q+  ASL+P M +G Q+ E  + +  
Sbjct: 68  RIVGGTIKFKGRDLNTMSPEELRRIRGKEIAMIYQEPMASLNPAMRIGKQLMEVPM-IHE 126

Query: 129 SLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADEP 188
            +S   A  RA+D++  V +P+P+R   ++PHQ SGGQ+QR+VIA+AL  +P ++I DEP
Sbjct: 127 GVSEDVAYQRALDVVTDVRLPDPKRILNSFPHQLSGGQQQRIVIAMALMANPALLILDEP 186

Query: 189 TSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTTA 248
           T+ALD TV+  V++L+K L  + G S++ ++H++G+I E  +R+ VM  G+ VE      
Sbjct: 187 TTALDVTVEAAVVDLVKDLGKKYGTSMLFISHNLGLILETCDRLCVMYSGEAVETGSIED 246

Query: 249 ILDQPRHDYTKKLLAAV----------PRLRIP--------------------------- 271
           + D+ +H YT+ L  ++          P + IP                           
Sbjct: 247 VFDEMQHPYTQALFRSIPLPGADKNARPLVAIPGNFPLPHERPKGCNFGPHCDYFQPGLC 306

Query: 272 -----------------TRTAKAEDNGRQADSPAIDSDQNP-----LLIAEGLSKQFAPQ 309
                            +R  + E+    A     D  + P     +L  + L K +   
Sbjct: 307 DAQDIRMRKIPGDDRHGSRCLRFEEIDWNAPVEKADQTEKPEPGRVVLNMDNLKKYYEVA 366

Query: 310 GFAWGIGRGKPRFGLR-DVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIG 368
             A   G+ K       D+      G    IVGESG GK+TF ++L GL+TA  G I + 
Sbjct: 367 ASALFGGKNKKVVKANEDLSFEAREGETLAIVGESGCGKSTFAKVLMGLETATDGTILLD 426

Query: 369 EHPF-DVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIR-FGARIRSGEEPAD 426
                D+    R +  +  VQM+FQ+P  +LNP MT+G  +  ++  FG           
Sbjct: 427 NREIQDIEIQDRDTKTVADVQMVFQNPFDTLNPSMTVGRQIIRALEIFGVGDTEDARKQR 486

Query: 427 LAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEI 486
           +  ++D + LPR+   R P QLSGGQKQRV IARA      I+VADEP SALDVSVQA +
Sbjct: 487 MLELLDLVKLPRAFANRMPRQLSGGQKQRVGIARAFAGDARIVVADEPVSALDVSVQAAV 546

Query: 487 VQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRA 546
             LL +   +   T++FISHDL+IV+ +   V +   G + + G T+ +FS   +PYT A
Sbjct: 547 TDLLMEIQRQNQTTLLFISHDLSIVRYLSDRVMVMYLGHVVELGTTDEVFSPPYHPYTEA 606

Query: 547 LINARP 552
           L++A P
Sbjct: 607 LLSAVP 612