Pairwise Alignments

Query, 505 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 517 a.a., D-ribose ABC transporter, ATPase component RbsA (from data) from Pseudomonas fluorescens FW300-N1B4

 Score =  282 bits (721), Expect = 2e-80
 Identities = 176/489 (35%), Positives = 275/489 (56%), Gaps = 22/489 (4%)

Query: 15  VAKLTDVWKSYGAVPVLKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVIASNAGAIEI 74
           V  ++ + K+Y A PVL G+ L L  GEV AL G NGAGKS+L KI+ G++A   G +  
Sbjct: 9   VLSVSGIGKTY-AQPVLTGIDLTLMRGEVLALTGENGAGKSTLSKIIGGLVAPTTGQMRF 67

Query: 75  NGRALTHASPALAQKLGLYLVPQEAHILPNQSVLENICL------GLAASPRALRPRVEQ 128
            GR     S + A++LG+ +V QE ++LP  SV EN+ L      G   S + LR    +
Sbjct: 68  QGRDYRPGSRSQAEELGIRMVMQELNLLPTLSVAENLFLDNLPSHGGWISRKQLRKAAIE 127

Query: 129 LVAELSV-SLDLDVQAAALEIAERQIVEILRGLVRDARVLILDEPTSALTPFETSALFQR 187
            +A++ + ++D D     L I  +Q+VEI R L+ D  VLILDEPT+ LT  E   LF++
Sbjct: 128 AMAQVGLDAIDPDTLVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVEMLFEQ 187

Query: 188 VRKLQSQGVGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAVIIDAMSRVQIA 247
           + +LQ++GV I +ISH+L E+  +   I+VLRDG +V   P+ +Y+   ++  M   ++ 
Sbjct: 188 ITRLQARGVSIIYISHRLEELARVAQRIAVLRDGNLVCVEPMANYNSEQLVTLMVGRELG 247

Query: 248 DDADKKRVCRKVSQIGKPRLSVRDLS-GEGFRDISLDVRAGEILGLAGVVGAGRTEFAET 306
           +  D         +IG P L+V+ L+  +  RD+S +VRAGEI G++G++GAGRTE    
Sbjct: 248 EHID-----MGPRKIGAPALTVKGLTRSDKVRDVSFEVRAGEIFGISGLIGAGRTELLRL 302

Query: 307 LFGLRPQMGGSVVFDGAE--LKKRSPRICIDLGLVYLPEDRQQHGLFLEAPLSWNVS--S 362
           +FG      G+V    +   +  RSP   +  G+  + EDR+  GL L   +S N++  +
Sbjct: 303 IFGADTADSGTVALGASAQVVSIRSPADAVGHGIALITEDRKGEGLLLTQSISANIALGN 362

Query: 363 YLVHRLPFFLRPGAERKVFDGFRASMGIKCTGADQEARGLSGGNQQKVLLAKCLSARPKV 422
             V     F+  G E  +      +M I+ +   Q    LSGGNQQKV++ + L     V
Sbjct: 363 MPVISSGGFVNNGDEMSLAQRQINAMRIRSSSPTQLVSELSGGNQQKVVIGRWLERDCTV 422

Query: 423 LILDEPTRGVDVAARNDLYDVIRRLAADGVAIILISSDFHEIEQLADRVEIMAFGQSGGK 482
           ++ DEPTRG+DV A+ D+Y ++  L   G A++++SSD  E+  + DR+ ++    S G+
Sbjct: 423 MLFDEPTRGIDVGAKFDIYALLGELTRQGKALVVVSSDLRELMLICDRIGVL----SAGR 478

Query: 483 LTDQISVDA 491
           L D    D+
Sbjct: 479 LIDTFERDS 487



 Score = 68.9 bits (167), Expect = 4e-16
 Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 16/225 (7%)

Query: 31  LKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVIASNAGAIEINGRA--LTHASPALAQ 88
           ++ VS  + AGE+  + G  GAG++ L++++ G   +++G + +   A  ++  SPA A 
Sbjct: 273 VRDVSFEVRAGEIFGISGLIGAGRTELLRLIFGADTADSGTVALGASAQVVSIRSPADAV 332

Query: 89  KLGLYLVPQEAH---ILPNQSVLENICLG---LAASPRALRPRVEQLVAELSVSLDLDVQ 142
             G+ L+ ++     +L  QS+  NI LG   + +S   +    E  +A+  ++  + ++
Sbjct: 333 GHGIALITEDRKGEGLLLTQSISANIALGNMPVISSGGFVNNGDEMSLAQRQINA-MRIR 391

Query: 143 AAA-------LEIAERQIVEILRGLVRDARVLILDEPTSALTPFETSALFQRVRKLQSQG 195
           +++       L    +Q V I R L RD  V++ DEPT  +       ++  + +L  QG
Sbjct: 392 SSSPTQLVSELSGGNQQKVVIGRWLERDCTVMLFDEPTRGIDVGAKFDIYALLGELTRQG 451

Query: 196 VGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAVIIDA 240
             +  +S  LRE+  IC  I VL  G ++ +   DS++   ++ A
Sbjct: 452 KALVVVSSDLRELMLICDRIGVLSAGRLIDTFERDSWTQDDLLAA 496