Pairwise Alignments

Query, 343 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 337 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  168 bits (425), Expect = 2e-46
 Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 4/310 (1%)

Query: 1   MLDLFSRNRVATLILVLAVAYAAIGTAAPGYLSGATASVVVSNSLVLMLISLGTMMVILT 60
           M+    + R   L +V+ +    +G  +P ++       + +++ +L++++LG MMV+LT
Sbjct: 1   MIKNLLKYRELLLAVVIVLMVLGVGVRSPEFIGAGNLLEMFNDTSILIILALGQMMVLLT 60

Query: 61  RNIDVSSGSVLGLSAAVLGLSLTAGVSLPLAIAFCLAT--GAVAGAFNGLMVAYLGIPSI 118
           + ID+S  + L L+  ++ L       +P+     LAT  G V GA NGL+V  +GIP I
Sbjct: 61  KGIDLSMAANLALTGMIVALINFHHPDIPVWSLVLLATVLGLVMGAINGLLVWKVGIPPI 120

Query: 119 VATLGTLGLYRGIMLVLTGGRWIE--DLPQGLKALAANLGFGFSVLTIVVLALVALAWIV 176
           V TLGT+ +YRGI+ +L+ G WI    +     +L      G  +L    +A + L    
Sbjct: 121 VVTLGTMSIYRGIIFLLSNGGWINAHQMSPEFLSLPRTTFIGLPLLGWCAIAALILVAYF 180

Query: 177 LRRTRFGRNFYAVGDNRAAAHHLGVPVKLVQFSAFVATGVCAALAGLVFAAQIGFIPNQA 236
           LR +R GR  Y  G N  AA++ G+    +QF +F  +G  A   G ++ ++        
Sbjct: 181 LRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVDV 240

Query: 237 GNGIELKAIAVNVLGGVSLLGGTGSVAGVFTAVIFITSIDSALVFLKIPAYWNDFIAGAI 296
            NG EL+ +A  V+GG+S +GG GSV G     +F+  I++AL  +++  +W   I+G +
Sbjct: 241 ANGFELQIVAACVIGGISTMGGIGSVVGCLLGALFLGVINNALPVIEVSPFWQMAISGGV 300

Query: 297 LLSVLLLDGR 306
           ++  ++L+ R
Sbjct: 301 IVIAVILNER 310